RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
LETMD1-220ENST00000549686 NUP88Q99567 741 aaPredicted RBP20.09■□□□□ 0.81
LETMD1-220ENST00000549686 JMJD4Q9H9V9 463 aa20.09■□□□□ 0.81
LETMD1-220ENST00000549686 MTMR6Q9Y217 621 aa20.09■□□□□ 0.81
LETMD1-220ENST00000549686 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 VPS37CA5D8V6 355 aaPredicted RBP20.08■□□□□ 0.81
LETMD1-220ENST00000549686 ZBTB5O15062 677 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 ZSCAN22P10073 491 aaPredicted RBP20.08■□□□□ 0.81
LETMD1-220ENST00000549686 FDX1P10109 184 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 HMGCS2P54868 508 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.81
LETMD1-220ENST00000549686 PROCA1Q8NCQ7 364 aaPredicted RBP20.08■□□□□ 0.81
LETMD1-220ENST00000549686 CCDC148Q8NFR7 591 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 OPTNQ96CV9 577 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 PNMA2Q9UL42 364 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 ATP6V1DQ9Y5K8 247 aa20.08■□□□□ 0.81
LETMD1-220ENST00000549686 OTOFQ9HC10 1997 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 A0A0G2JLL6 359 aaPredicted RBP20.07■□□□□ 0.8
LETMD1-220ENST00000549686 YY1P25490 414 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 SLC16A2P36021 539 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 FSTL1Q12841 308 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 SAFBQ15424 915 aaKnown RBP eCLIP20.07■□□□□ 0.8
LETMD1-220ENST00000549686 CST9Q5W186 159 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 FASTKD5Q7L8L6 764 aaKnown RBP20.07■□□□□ 0.8
LETMD1-220ENST00000549686 PRRT2Q7Z6L0 340 aaPredicted RBP20.07■□□□□ 0.8
LETMD1-220ENST00000549686 PIGSQ96S52 555 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 SLF1Q9BQI6 1058 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 BARHL2Q9NY43 387 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 PRR12Q9ULL5 1215 aa20.07■□□□□ 0.8
LETMD1-220ENST00000549686 IRF6O14896 467 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 DTNBO60941 627 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 CALML3P27482 149 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 SNAPC2Q13487 334 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 KRT40Q6A162 431 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 HOMER1Q86YM7 354 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 PRPF38AQ8NAV1 312 aaKnown RBP20.06■□□□□ 0.8
LETMD1-220ENST00000549686 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 CPVLQ9H3G5 476 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 ZSCAN16Q9H4T2 348 aaPredicted RBP20.06■□□□□ 0.8
LETMD1-220ENST00000549686 RPAP3Q9H6T3 665 aaPredicted RBP20.06■□□□□ 0.8
LETMD1-220ENST00000549686 BRMS1Q9HCU9 246 aa20.06■□□□□ 0.8
LETMD1-220ENST00000549686 MYPNQ86TC9 1320 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L15C9J2P7 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L13C9JLJ4 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L11C9JVI0 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L18D6R9N7 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L22D6RA61 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L17D6RBQ6 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L19D6RCP7 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L20D6RJB6 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 F13A1P00488 732 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 ZBTB48P10074 688 aaPredicted RBP20.05■□□□□ 0.8
LETMD1-220ENST00000549686 USP17L24Q0WX57 530 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 PKP1Q13835 747 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 CDC37Q16543 378 aaPredicted RBP20.05■□□□□ 0.8
LETMD1-220ENST00000549686 HEATR3Q7Z4Q2 680 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 TEX2Q8IWB9 1127 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 AIFM3Q96NN9 605 aa20.05■□□□□ 0.8
LETMD1-220ENST00000549686 hCG_1642624A0A1W2PR95 340 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 MMP1P03956 469 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 HUNKP57058 714 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 PABPC4Q13310 644 aaKnown RBP eCLIP20.04■□□□□ 0.8
LETMD1-220ENST00000549686 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 KIFC2Q96AC6 838 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 WNK4Q96J92 1243 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 AMNQ9BXJ7 453 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 RANBP17Q9H2T7 1088 aaKnown RBP20.04■□□□□ 0.8
LETMD1-220ENST00000549686 PPP1R9AQ9ULJ8 1098 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 ZDHHC9Q9Y397 364 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
LETMD1-220ENST00000549686 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 STXBP3O00186 592 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 FLOT1O75955 427 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 HOXA7P31268 230 aaPredicted RBP20.03■□□□□ 0.8
LETMD1-220ENST00000549686 GTF2A2P52657 109 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 QRICH1Q2TAL8 776 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 WWC2Q6AWC2 1192 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 CATSPERGQ6ZRH7 1159 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 PHF20Q9BVI0 1012 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 GLT8D2Q9H1C3 349 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 VPS54Q9P1Q0 977 aa20.03■□□□□ 0.8
LETMD1-220ENST00000549686 CETPP11597 493 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 GNA11P29992 359 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 FOSBP53539 338 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 NAPAP54920 295 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 NLRP5P59047 1200 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 GUCY1B3Q02153 619 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 COG2Q14746 738 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 BRAPQ7Z569 592 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 FBXO11Q86XK2 927 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 FOXP1Q9H334 677 aaPredicted RBP20.02■□□□□ 0.8
LETMD1-220ENST00000549686 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.02■□□□□ 0.8
LETMD1-220ENST00000549686 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.8
LETMD1-220ENST00000549686 ZBED4O75132 1171 aa20.01■□□□□ 0.79
LETMD1-220ENST00000549686 GNL2Q13823 731 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms