RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 MAGEB6Q8N7X4 407 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 PCSK9Q8NBP7 692 aaKnown RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 VCPKMTQ9H867 229 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 FBXO28Q9NVF7 368 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 COG5Q9UP83 839 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 PCDHA11Q9Y5I1 949 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 UMODL1Q5DID0 1318 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 WDR46O15213 610 aaKnown RBP10.84□□□□□ -0.67
UBE2N-203ENST00000549490 GJA9P57773 515 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 TMEM179Q6ZVK1 233 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
UBE2N-203ENST00000549490 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
UBE2N-203ENST00000549490 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 SPC25Q9HBM1 224 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-203ENST00000549490 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
UBE2N-203ENST00000549490 CDK5RAP2Q96SN8 1893 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 PI4K2BG5E9Z4 385 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 VWA5AO00534 786 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 CTAGE5O15320 804 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
UBE2N-203ENST00000549490 CCL23P55773 120 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 KRT40Q6A162 431 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 REPS2Q8NFH8 660 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 VWCEQ96DN2 955 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 CERS4Q9HA82 394 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 CD320Q9NPF0 282 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 MCM9Q9NXL9 1143 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
UBE2N-203ENST00000549490 DNAJC25-GNG10A0A024R161 153 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 SMIM22K7EJ46 135 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 GNAI2P04899 355 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 CYP2D6P10635 497 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 AKR1B1P15121 316 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
UBE2N-203ENST00000549490 COPB2P35606 906 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 MRE11P49959 708 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 ICA1Q05084 483 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 HLA-CQ95604 372 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 DDX11Q96FC9 970 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 SNX27Q96L92 541 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
UBE2N-203ENST00000549490 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 ANTXR1Q9H6X2 564 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 TLR7Q9NYK1 1049 aaKnown RBP10.82□□□□□ -0.68
UBE2N-203ENST00000549490 DBNLQ9UJU6 430 aaKnown RBP10.82□□□□□ -0.68
UBE2N-203ENST00000549490 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
UBE2N-203ENST00000549490 PRRC2BQ5JSZ5 2229 aaKnown RBP10.82□□□□□ -0.68
UBE2N-203ENST00000549490 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 CA3P07451 260 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 NKX3-2P78367 333 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 BEX3Q00994 111 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 TMEM67Q5HYA8 995 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-203ENST00000549490 CXCL17Q6UXB2 119 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-203ENST00000549490 RPUSD2Q8IZ73 545 aaKnown RBP10.81□□□□□ -0.68
UBE2N-203ENST00000549490 DYNLL2Q96FJ2 89 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 CCDC8Q9H0W5 538 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-203ENST00000549490 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-203ENST00000549490 SWAP70Q9UH65 585 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 RIPK3Q9Y572 518 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 GRIN2DO15399 1336 aa10.81□□□□□ -0.68
UBE2N-203ENST00000549490 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 PRR33A8MZF0 331 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
UBE2N-203ENST00000549490 TTLL4Q14679 1199 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 FGD4Q96M96 766 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 TEX13BQ9BXU2 312 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 CRNKL1Q9BZJ0 848 aaKnown RBP10.8□□□□□ -0.68
UBE2N-203ENST00000549490 ABHD16BQ9H3Z7 469 aa10.8□□□□□ -0.68
UBE2N-203ENST00000549490 ANP32CO43423 234 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 B4GALT4O60513 344 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 ARHGEF15O94989 841 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 EEF2P13639 858 aaKnown RBP10.79□□□□□ -0.68
UBE2N-203ENST00000549490 ITGA7Q13683 1181 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 POLA2Q14181 598 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 SNRNP48Q6IEG0 339 aaKnown RBP10.79□□□□□ -0.68
UBE2N-203ENST00000549490 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
UBE2N-203ENST00000549490 SDR42E1Q8WUS8 393 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 ARNTL2Q8WYA1 636 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 EAF2Q96CJ1 260 aaPredicted RBP10.79□□□□□ -0.68
UBE2N-203ENST00000549490 SCLYQ96I15 445 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms