RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 PI4K2BQ8TCG2 481 aa8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 IDI2Q9BXS1 227 aa8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 DDX20Q9UHI6 824 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 MGAMO43451 1857 aa8.47□□□□□ -1.05
DEPDC4-208ENST00000549341 KBTBD13C9JR72 458 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 FGFR2P21802 821 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 ERVK-24P63145 666 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 ANO1Q5XXA6 986 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 LPIN2Q92539 896 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 P2RX7Q99572 595 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 AS3MTQ9HBK9 375 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 PDLIM7Q9NR12 457 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 FLRT1Q9NZU1 646 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 GAKO14976 1311 aa8.46□□□□□ -1.06
DEPDC4-208ENST00000549341 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 USP17L5A8MUK1 530 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 CHMLP26374 656 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 CYP2C19P33261 490 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 PHKA1P46020 1223 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 RBM25P49756 843 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 MORN1Q5T089 497 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 ATG9AQ7Z3C6 839 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 LPAR1Q92633 364 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 FERMT2Q96AC1 680 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 TIFAQ96CG3 184 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 ASB2Q96Q27 587 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 GAS2L1Q99501 681 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 ESYT1Q9BSJ8 1104 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 FSD1Q9BTV5 496 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 OSBPL5Q9H0X9 879 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 BOLA2Q9H3K6 86 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
DEPDC4-208ENST00000549341 MAST2Q6P0Q8 1798 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 TRIM43BA6NCK2 446 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 MSCO60682 206 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 GDF11O95390 407 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 UQCRFS1P1P0C7P4 283 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 CAP2P40123 477 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 EPHB4P54760 987 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 MAP3K10Q02779 954 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 MAP2K5Q13163 448 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 RRP1BQ14684 758 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 ZYXQ15942 572 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 TSHZ3Q63HK5 1081 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 HSCBQ8IWL3 235 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 ATXN2LQ8WWM7 1075 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 USP6NLQ92738 828 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 TRIM43Q96BQ3 446 aaPredicted RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 DBNDD2Q9BQY9 259 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 ZNF576Q9H609 170 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 DBNLQ9UJU6 430 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 DENND2AQ9ULE3 1009 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 XIRP2A4UGR9 3374 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 MROH7-TTC4A0A0A0MT08 1334 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 RAD50Q92878 1312 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 DOCK1Q14185 1865 aa8.44□□□□□ -1.06
DEPDC4-208ENST00000549341 PQBP1O60828 265 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 CFHP08603 1231 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 IGFBP4P22692 258 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 ADORA1P30542 326 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 BACE1P56817 501 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 RABEP1Q15276 862 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 TTF1Q15361 905 aaPredicted RBP8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 Q3C1V9 767 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 SLC39A5Q6ZMH5 540 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 CCDC129Q6ZRS4 1044 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 ZGPATQ8N5A5 531 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 TRPV1Q8NER1 839 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 EDC3Q96F86 508 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 FEZ1Q99689 392 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 HAUS7Q99871 368 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 PRDM12Q9H4Q4 367 aa8.43□□□□□ -1.06
DEPDC4-208ENST00000549341 ANO2Q9NQ90 1003 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms