RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 NAPAP54920 295 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.19
PTPRR-209ENST00000549308 DLK2Q6UY11 383 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 NOSTRINQ8IVI9 506 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.19
PTPRR-209ENST00000549308 OXER1Q8TDS5 423 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.19
PTPRR-209ENST00000549308 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.19
PTPRR-209ENST00000549308 KLRG1Q96E93 195 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 CDCA5Q96FF9 252 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 AS3MTQ9HBK9 375 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 BARHL2Q9NY43 387 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 USP2O75604 605 aaPredicted RBP13.89□□□□□ -0.19
PTPRR-209ENST00000549308 NF2P35240 595 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 NR5A1Q13285 461 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
PTPRR-209ENST00000549308 LEO1Q8WVC0 666 aaPredicted RBP13.89□□□□□ -0.19
PTPRR-209ENST00000549308 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
PTPRR-209ENST00000549308 DDX49Q9Y6V7 483 aaKnown RBP13.89□□□□□ -0.19
PTPRR-209ENST00000549308 ZBTB5O15062 677 aa13.88□□□□□ -0.19
PTPRR-209ENST00000549308 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
PTPRR-209ENST00000549308 PTPRAP18433 802 aa13.88□□□□□ -0.19
PTPRR-209ENST00000549308 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
PTPRR-209ENST00000549308 NOL9Q5SY16 702 aaKnown RBP13.88□□□□□ -0.19
PTPRR-209ENST00000549308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTPRR-209ENST00000549308 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTPRR-209ENST00000549308 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
PTPRR-209ENST00000549308 PCDHA4Q9UN74 947 aa13.88□□□□□ -0.19
PTPRR-209ENST00000549308 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
PTPRR-209ENST00000549308 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
PTPRR-209ENST00000549308 STAT2P52630 851 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
PTPRR-209ENST00000549308 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 BTNL9Q6UXG8 535 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 BLIDQ8IZY5 108 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 COA7Q96BR5 231 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 MTMR8Q96EF0 704 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 KIAA1683Q9H0B3 1180 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
PTPRR-209ENST00000549308 ELP1O95163 1332 aa13.87□□□□□ -0.19
PTPRR-209ENST00000549308 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 SMCO2A6NFE2 343 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 MBD3O95983 291 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 USP14P54578 494 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 UBE2HP62256 183 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 MAP3K9P80192 1104 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
PTPRR-209ENST00000549308 STK38Q15208 465 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 NPY5RQ15761 445 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 QRICH1Q2TAL8 776 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 FAM160B2Q86V87 743 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 DAGLBQ8NCG7 672 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 RCOR1Q9UKL0 485 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
PTPRR-209ENST00000549308 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 GNA11P29992 359 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 SPP2Q13103 211 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 MTMR2Q13614 643 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
PTPRR-209ENST00000549308 RILPL1Q5EBL4 403 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 ZNF280CQ8ND82 737 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 LPAR1Q92633 364 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 POLR3EQ9NVU0 708 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 FEM1BQ9UK73 627 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 CSADQ9Y600 493 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 ZHX2Q9Y6X8 837 aa13.86□□□□□ -0.19
PTPRR-209ENST00000549308 ESYT2A0FGR8 921 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
PTPRR-209ENST00000549308 PPP1R11O60927 126 aaPredicted RBP13.85□□□□□ -0.19
PTPRR-209ENST00000549308 YEATS4O95619 227 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 SNAP25P60880 206 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 VGLL4Q14135 290 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
PTPRR-209ENST00000549308 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 KIFC2Q96AC6 838 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
PTPRR-209ENST00000549308 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 TRIM75PA6NK02 468 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 PLA2G6O60733 806 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms