RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 SHOXO15266 292 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 ITGA4P13612 1032 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 SNW1Q13573 536 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 NOL9Q5SY16 702 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 DCAF15Q66K64 600 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 TMC3Q7Z5M5 1100 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 FAM178BQ8IXR5 827 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 HNRNPLLQ8WVV9 542 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 HDAC8Q9BY41 377 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 KLHL25Q9H0H3 589 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 GBP3Q9H0R5 595 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 GP6Q9HCN6 339 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 CHST7Q9NS84 486 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 MBNL3Q9NUK0 354 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 WHRNQ9P202 907 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 DUSP13Q9UII6 198 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 FHOD1Q9Y613 1164 aa6.5□□□□□ -1.37
DEPDC4-205ENST00000548313 ANKRD34BA5PLL1 514 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 U2SURPO15042 1029 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 CBFA2T2O43439 604 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 DDAH1O94760 285 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 PRAMEF1O95521 474 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 ESR1P03372 595 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 ZP2Q05996 745 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 SLC23A3Q6PIS1 610 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 C6orf15Q6UXA7 325 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 CREG2Q8IUH2 290 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 FAM53CQ9NYF3 392 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 DIS3Q9Y2L1 958 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 ZNF451Q9Y4E5 1061 aa6.49□□□□□ -1.37
DEPDC4-205ENST00000548313 PPM1BO75688 479 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 GSNP06396 782 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 EPHX1P07099 455 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 CD96P40200 585 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 PCBP3P57721 371 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 ZNF445P59923 1031 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 DDR2Q16832 855 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 RNF111Q6ZNA4 994 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 LINC00116Q8NCU8 138 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 UBXN4Q92575 508 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 TCTN2Q96GX1 697 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 CCDC120Q96HB5 630 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 RCC1LQ96I51 464 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 APBA2Q99767 749 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 DSCC1Q9BVC3 393 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 EPN3Q9H201 632 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 GFOD1Q9NXC2 390 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 SF3B6Q9Y3B4 125 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-205ENST00000548313 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 ENDOUP21128 410 aaKnown RBP6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 LTKP29376 864 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 MESP2Q0VG99 397 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 ADAT2Q7Z6V5 191 aaKnown RBP6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 LRRN4CLQ8ND94 238 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 TOX2Q96NM4 488 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 CARS2Q9HA77 564 aaKnown RBP6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 ADAMTS6Q9UKP5 1117 aa6.47□□□□□ -1.37
DEPDC4-205ENST00000548313 LRRC10BA6NIK2 292 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 GJB6O95452 261 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 BMP8BP34820 402 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 EGR3Q06889 387 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 CWF19L1Q69YN2 538 aaKnown RBP6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 ARHGEF39Q8N4T4 335 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 CELF2-AS1Q8N7Q2 184 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 MICAL1Q8TDZ2 1067 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 SYTL4Q96C24 671 aaPredicted RBP6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 PCDHA11Q9Y5I1 949 aa6.46□□□□□ -1.38
DEPDC4-205ENST00000548313 SSU72P8A0A1W2PR75 194 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 NOP2P46087 812 aaKnown RBP6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 POMZP3Q6PJE2 187 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 LRP10Q7Z4F1 713 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 CRACR2BQ8N4Y2 399 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 FIBCD1Q8N539 461 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 BRF1Q92994 677 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 FGD4Q96M96 766 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 ALPK1Q96QP1 1244 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 CCDC113Q9H0I3 377 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 ST7Q9NRC1 585 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 TCFL5Q9UL49 500 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 ZNF281Q9Y2X9 895 aa6.45□□□□□ -1.38
DEPDC4-205ENST00000548313 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 SUSD5O60279 629 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 CTSKP43235 329 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 RAP1GAPP47736 663 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 POU4F1Q01851 419 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 TEKQ02763 1124 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 GRB10Q13322 594 aa6.44□□□□□ -1.38
DEPDC4-205ENST00000548313 SERINC3Q13530 473 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms