RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 INPP5FQ9Y2H2 1132 aa3.41□□□□□ -1.86
CPNE8-205ENST00000547417 ZNF281Q9Y2X9 895 aa3.41□□□□□ -1.86
CPNE8-205ENST00000547417 IRAK3Q9Y616 596 aa3.41□□□□□ -1.86
CPNE8-205ENST00000547417 PRR36Q9H6K5 1346 aa3.41□□□□□ -1.86
CPNE8-205ENST00000547417 SSU72P8A0A1W2PR75 194 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 NOTOA8MTQ0 251 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 USP2O75604 605 aaPredicted RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 F13A1P00488 732 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 PI3P19957 117 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 GBP1P32455 592 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 KIR2DL1P43626 348 aaPredicted RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 KIR2DL2P43627 348 aaPredicted RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 SRSF3P84103 164 aaKnown RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 LMNB2Q03252 620 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 NMIQ13287 307 aaPredicted RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 PWP1Q13610 501 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 USP48Q86UV5 1035 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 PHACTR4Q8IZ21 702 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 USHBP1Q8N6Y0 703 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 DAGLBQ8NCG7 672 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 CXorf38Q8TB03 319 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 SYTL5Q8TDW5 730 aaPredicted RBP3.4□□□□□ -1.87
CPNE8-205ENST00000547417 PANK1Q8TE04 598 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 KIF2CQ99661 725 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 ACBD3Q9H3P7 528 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 RTEL1Q9NZ71 1219 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 GGT7Q9UJ14 662 aa3.4□□□□□ -1.87
CPNE8-205ENST00000547417 N4BP3O15049 544 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 NRDCO43847 1150 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 PF4P02776 101 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 CDK11BP21127 795 aaKnown RBP3.39□□□□□ -1.87
CPNE8-205ENST00000547417 GJA8P48165 433 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 AFF3P51826 1226 aaKnown RBP3.39□□□□□ -1.87
CPNE8-205ENST00000547417 KRTAP10-2P60368 255 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 CEP128Q6ZU80 1094 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 WAPLQ7Z5K2 1190 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 RELL1Q8IUW5 271 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 DACT3Q96B18 629 aaPredicted RBP3.39□□□□□ -1.87
CPNE8-205ENST00000547417 VWCEQ96DN2 955 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 MAP6Q96JE9 813 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 HDAC8Q9BY41 377 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 XYLT2Q9H1B5 865 aa3.39□□□□□ -1.87
CPNE8-205ENST00000547417 CDK11AQ9UQ88 783 aaPredicted RBP3.39□□□□□ -1.87
CPNE8-205ENST00000547417 POLR3KQ9Y2Y1 108 aaPredicted RBP3.39□□□□□ -1.87
CPNE8-205ENST00000547417 OTOL1A6NHN0 477 aaPredicted RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 F6X3S4 739 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 ABLIM1O14639 778 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RGS13O14921 159 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 GRIN3BO60391 1043 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 HTR3BO95264 441 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 EFEMP2O95967 443 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 PNLIPP16233 465 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 DNAJA1P31689 397 aaKnown RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 VIPR1P32241 457 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 GTF2F1P35269 517 aaKnown RBP eCLIP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 EPHB3P54753 998 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 PCBP3P57721 371 aaKnown RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RACK1P63244 317 aaKnown RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 YBX1P67809 324 aaKnown RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RNF4P78317 190 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 MLECQ14165 292 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 ZNF394Q53GI3 561 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 NBPF6Q5VWK0 638 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 ERICH6BQ5W0A0 696 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 OLFML2BQ68BL8 750 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 ERMP1Q7Z2K6 904 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 ZNF655Q8N720 491 aaPredicted RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 LINC00116Q8NCU8 138 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RASGRP4Q8TDF6 673 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 TCTN2Q96GX1 697 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 SEC16BQ96JE7 1060 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RHOVQ96L33 236 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 NBPF4Q96M43 638 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 RSRP1Q9BUV0 290 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 FOXP3Q9BZS1 431 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 LNPKQ9C0E8 428 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 CNTD2Q9H8S5 307 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 TCFL5Q9UL49 500 aa3.38□□□□□ -1.87
CPNE8-205ENST00000547417 TMA7Q9Y2S6 64 aaKnown RBP3.38□□□□□ -1.87
CPNE8-205ENST00000547417 TLDC2A0PJX2 215 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 DNAJA2O60884 412 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 ATF4P18848 351 aaPredicted RBP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 GBP2P32456 591 aaPredicted RBP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 ERVFRD-1P60508 538 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 MPP2Q14168 576 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 SKOR2Q2VWA4 1001 aaPredicted RBP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 SNAP47Q5SQN1 464 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 CNKSR3Q6P9H4 555 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 GIMAP6Q6P9H5 292 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 GGNQ86UU5 652 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 MCF2L2Q86YR7 1114 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 SP8Q8IXZ3 490 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 GPRASP2Q96D09 838 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 HHIPL1Q96JK4 782 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 TMEM74Q96NL1 305 aa3.37□□□□□ -1.87
CPNE8-205ENST00000547417 DNAJC2Q99543 621 aaKnown RBP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 EPB41L4AQ9HCS5 686 aaPredicted RBP3.37□□□□□ -1.87
CPNE8-205ENST00000547417 TMEM82A0PJX8 343 aa3.36□□□□□ -1.87
CPNE8-205ENST00000547417 SLC22A31A6NKX4 558 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms