RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PHBP35232 272 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 COPS6Q7L5N1 327 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 TRIM42Q8IWZ5 723 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 MAP4K1Q92918 833 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-212ENST00000546744 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 PLCG2P16885 1265 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 DEUP1Q05D60 604 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 TAF11Q15544 211 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 PPP1R21Q6ZMI0 780 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 GFM2Q969S9 779 aaKnown RBP14.1□□□□□ -0.15
PTCH1-212ENST00000546744 TPCN1Q9ULQ1 816 aa14.1□□□□□ -0.15
PTCH1-212ENST00000546744 BCRP11274 1271 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 C10orf76Q5T2E6 689 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 HIBCHQ6NVY1 386 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-212ENST00000546744 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 SART1O43290 800 aaKnown RBP14.09□□□□□ -0.15
PTCH1-212ENST00000546744 PSMC4P43686 418 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 PNOCQ13519 176 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 ARHGEF18Q6ZSZ5 1173 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 ATP2A3Q93084 1043 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 OSBPL9Q96SU4 736 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 CENPKQ9BS16 269 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 PALD1Q9ULE6 856 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 AATKQ6ZMQ8 1374 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 OPHN1O60890 802 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 NNTQ13423 1086 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 ZMAT2Q96NC0 199 aaKnown RBP14.09□□□□□ -0.15
PTCH1-212ENST00000546744 SLIT1O75093 1534 aa14.09□□□□□ -0.15
PTCH1-212ENST00000546744 TXNDC9O14530 226 aa14.08□□□□□ -0.15
PTCH1-212ENST00000546744 GUCY2FP51841 1108 aa14.08□□□□□ -0.15
PTCH1-212ENST00000546744 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.15
PTCH1-212ENST00000546744 ANKRD35Q8N283 1001 aa14.08□□□□□ -0.15
PTCH1-212ENST00000546744 TCP11Q8WWU5 503 aa14.08□□□□□ -0.15
PTCH1-212ENST00000546744 LSG1Q9H089 658 aaKnown RBP14.08□□□□□ -0.15
PTCH1-212ENST00000546744 ZNF174Q15697 407 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 PBKQ96KB5 322 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 ABCB6Q9NP58 842 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 SERPINA10Q9UK55 444 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 SBNO1A3KN83 1393 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 TMEM94Q12767 1356 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 EYA2O00167 538 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 MRPL12P52815 198 aaKnown RBP14.08□□□□□ -0.16
PTCH1-212ENST00000546744 TFCP2Q12800 502 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 MTHFSDQ2M296 383 aaKnown RBP14.08□□□□□ -0.16
PTCH1-212ENST00000546744 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 GOLGA8QA0A0J9YX86 632 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 GOLGA8OA6NCC3 632 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 GOLGA8NF8WBI6 632 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 HSPA1LP34931 641 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 COG7P83436 770 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 GUCY2DQ02846 1103 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 CXorf56Q9H5V9 222 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 ANGPTL2Q9UKU9 493 aa14.08□□□□□ -0.16
PTCH1-212ENST00000546744 PASKQ96RG2 1323 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 CCDC188H7C350 402 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 H2AFZP0C0S5 128 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TRAPPC10P48553 1259 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 NDUFA8P51970 172 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 E2F5Q15329 346 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 GALNT17Q6IS24 598 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TYW1BQ6NUM6 668 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 H2AFVQ71UI9 128 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TRMT44Q8IYL2 757 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 RGS22Q8NE09 1264 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TPX2Q9ULW0 747 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 MYOM1P52179 1685 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TARSL2A2RTX5 802 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TMEM110-MUSTN1A8MSY1 372 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 HOXC9P31274 260 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 E7EWF7 191 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 CTNND1O60716 968 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
PTCH1-212ENST00000546744 GCP02774 474 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 STAT1P42224 750 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 SLC20A2Q08357 652 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 CHST3Q7LGC8 479 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 GDAP1L1Q96MZ0 367 aa14.07□□□□□ -0.16
PTCH1-212ENST00000546744 KCNK3O14649 394 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 RPSAP08865 295 aaKnown RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 TTLL7Q6ZT98 887 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 EYA1Q99502 592 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 HEXIM1O94992 359 aaKnown RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 CD2BP2O95400 341 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms