RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 TMEM232C9JQI7 657 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 TFRCP02786 760 aaKnown RBP15.35■□□□□ 0.05
LINC00661-201ENST00000546512 FCER1AP12319 257 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 COPB2P35606 906 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
LINC00661-201ENST00000546512 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
LINC00661-201ENST00000546512 MFSD14CQ5VZR4 134 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 ABRAQ8N0Z2 381 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 ESR2Q92731 530 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
LINC00661-201ENST00000546512 TOP1P11387 765 aaKnown RBP15.34■□□□□ 0.05
LINC00661-201ENST00000546512 SLC4A3P48751 1232 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 STAT2P52630 851 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 KCTD2Q14681 263 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
LINC00661-201ENST00000546512 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 RASGRP2Q7LDG7 609 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 CHURC1Q8WUH1 139 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 MMP19Q99542 508 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 TMEM47Q9BQJ4 181 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 SLC38A10Q9HBR0 1119 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 SLC5A4Q9NY91 659 aa15.34■□□□□ 0.05
LINC00661-201ENST00000546512 ATP2A1O14983 1001 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 COBLO75128 1261 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 FARP2O94887 1054 aaPredicted RBP15.33■□□□□ 0.04
LINC00661-201ENST00000546512 CAPN2P17655 700 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 NT5C2P49902 561 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 CCDC96Q2M329 555 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 DCAF4Q8WV16 495 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 ZKSCAN3Q9BRR0 538 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
LINC00661-201ENST00000546512 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.04
LINC00661-201ENST00000546512 B4E1Z4 1266 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 SGSM2O43147 1006 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 KDM4AO75164 1064 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 FDX1P10109 184 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
LINC00661-201ENST00000546512 CYP2C19P33261 490 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 OAZ1P54368 228 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 OLFML2BQ68BL8 750 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 SKAP1Q86WV1 359 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 TTC14Q96N46 770 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 RIPK3Q9Y572 518 aa15.32■□□□□ 0.04
LINC00661-201ENST00000546512 PLA2G6O60733 806 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 PGK2P07205 417 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 PTH1RQ03431 593 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
LINC00661-201ENST00000546512 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 MAML3Q96JK9 1138 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 KRT23Q9C075 422 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 CNNM2Q9H8M5 875 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
LINC00661-201ENST00000546512 IGHA2P01877 340 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 NEFLP07196 543 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 CNGA1P29973 690 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 FRMPD2Q68DX3 1309 aaPredicted RBP15.3■□□□□ 0.04
LINC00661-201ENST00000546512 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 ZSWIM5Q9P217 1185 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 OGDHLQ9ULD0 1010 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 PRR12Q9ULL5 1215 aa15.3■□□□□ 0.04
LINC00661-201ENST00000546512 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
LINC00661-201ENST00000546512 PDHBP11177 359 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 CYBAP13498 195 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 SLC16A2P36021 539 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 SNAP25P60880 206 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 ZNF792Q3KQV3 632 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 CHST13Q8NET6 341 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
LINC00661-201ENST00000546512 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 GPCPD1Q9NPB8 672 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 HOMER2Q9NSB8 354 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
LINC00661-201ENST00000546512 ZNF536O15090 1300 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 TNKSO95271 1327 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 CYP21A2P08686 494 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 LHX8Q68G74 356 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 CCDC174Q6PII3 467 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 BTNL9Q6UXG8 535 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 DIS3LQ8TF46 1054 aaKnown RBP15.28■□□□□ 0.04
LINC00661-201ENST00000546512 PAWRQ96IZ0 340 aaKnown RBP15.28■□□□□ 0.04
LINC00661-201ENST00000546512 AGBL1Q96MI9 1066 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
LINC00661-201ENST00000546512 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
LINC00661-201ENST00000546512 MSCO60682 206 aa15.27■□□□□ 0.04
LINC00661-201ENST00000546512 SNHG28P0DPA3 235 aa15.27■□□□□ 0.04
LINC00661-201ENST00000546512 ZNF543Q08ER8 600 aa15.27■□□□□ 0.04
LINC00661-201ENST00000546512 TRDNQ13061 729 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms