RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TECP42680 631 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 CASP8Q14790 479 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 CCDC105Q8IYK2 499 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 ZNF622Q969S3 477 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 MORC2Q9Y6X9 1032 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 CFAP74Q9C0B2 1584 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 PDE8BO95263 885 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 KRT5P13647 590 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 GUCY2DQ02846 1103 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 ADD2P35612 726 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 EPHB4P54760 987 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 FMR1NBQ8N0W7 255 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 SPATA24Q86W54 205 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 ANKRD13CQ8N6S4 541 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 U2AF1L4Q8WU68 220 aaKnown RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 CHMP2AO43633 222 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 ZMYND10O75800 440 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 PCP11498 1178 aaKnown RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 DHTKD1Q96HY7 919 aaPredicted RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 BCAMP50895 628 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 NR5A1Q13285 461 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 NEK8Q86SG6 692 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 PUS7LQ9H0K6 701 aaKnown RBP13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 RWDD2AQ9UIY3 292 aa13.49□□□□□ -0.25
NPC1L1-204ENST00000546276 A0A087WUV0 522 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 GCNT3O95395 438 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 BCRP11274 1271 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 XRCC5P13010 732 aaKnown RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 MYCBPQ99417 103 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■□□□□ 9.9
NPC1L1-204ENST00000546276 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 HGSO14964 777 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 STAT1P42224 750 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 SF3B2Q13435 895 aaKnown RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 GREM2Q9H772 168 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 DDIT3P35638 169 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 SF3A3Q12874 501 aaKnown RBP eCLIP13.48□□□□□ -0.259e-7■■□□□ 11.7
NPC1L1-204ENST00000546276 ALDH8A1Q9H2A2 487 aaPredicted RBP13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 ROBO2Q9HCK4 1378 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 EXOC3O60645 756 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 FERP16591 822 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
NPC1L1-204ENST00000546276 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 CCDC160A6NGH7 325 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 MFAP3LO75121 409 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 NDUFA10O95299 355 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 MYCT1Q8N699 235 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 EEF2KMTQ96G04 330 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 RASSF7Q02833 373 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 TSNAXIP1Q2TAA8 658 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 GPBP1Q86WP2 473 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 HOMER3Q9NSC5 361 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 CIB2O75838 187 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 UFL1O94874 794 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 DHX40Q8IX18 779 aaKnown RBP13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 P2RX5Q93086 422 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 BTG4Q9NY30 223 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms