RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	JADE2	Q9NQC1	790 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	DDX20	Q9UHI6	824 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	PA2G4	Q9UQ80	394 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	USP54	Q70EL1	1684 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	ABCB11	O95342	1321 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	BCL9L	Q86UU0	1499 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	ASAP2	O43150	1006 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	TEX33	O43247	280 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	FMNL1	O95466	1100 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	MMP1	P03956	469 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	FER	P16591	822 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	SCP2	P22307	547 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	HOXC9	P31274	260 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	GCK	P35557	465 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	HSPA9	P38646	679 aa	Known RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	TRAPPC10	P48553	1259 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	DPYD	Q12882	1025 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	IFT88	Q13099	833 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	MKRN4P	Q13434	485 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	KRT31	Q15323	416 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	ALX1	Q15699	326 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	CCDC57	Q2TAC2	916 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	ANKRD20A8P	Q5CZ79	823 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	C8orf74	Q6P047	294 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	TTLL7	Q6ZT98	887 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	CREG2	Q8IUH2	290 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	ACRBP	Q8NEB7	543 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	TATDN2	Q93075	761 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	CYFIP2	Q96F07	1278 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	IFT74	Q96LB3	600 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	METTL22	Q9BUU2	404 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	STMN4	Q9H169	189 aa	Predicted RBP	11.31	□□□□□ -0.6
UBC-213	ENST00000546120	STRN4	Q9NRL3	753 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	SERTAD1	Q9UHV2	236 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	KDM3B	Q7LBC6	1761 aa		11.31	□□□□□ -0.6
UBC-213	ENST00000546120	BICDL2	A1A5D9	508 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	KCNJ18	B7U540	433 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	PPP1R3G	B7ZBB8	358 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	KIF28P	B7ZC32	967 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ANKRD65	E5RJM6	399 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	PJA2	O43164	708 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ZBTB43	O43298	467 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	GTPBP6	O43824	516 aa	Predicted RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	DEXI	O95424	95 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	FGFR1OP	O95684	399 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ATP1A1	P05023	1023 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	CDC27	P30260	824 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	PDE6B	P35913	854 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	NT5C2	P49902	561 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF131	P52739	623 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	TNNC1	P63316	161 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	PTPN12	Q05209	780 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	GOLGA8F	Q08AF8	430 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	GOLGA8DP	Q0D2H9	430 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ITGB3BP	Q13352	177 aa	Predicted RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	KCNJ12	Q14500	433 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	KCNB1	Q14721	858 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	NAA25	Q14CX7	972 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	FOXR2	Q6PJQ5	311 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	CCDC84	Q86UT8	332 aa	Predicted RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	MB21D1	Q8N884	522 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	RNF217	Q8TC41	542 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	CPLX3	Q8WVH0	158 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	ATRIP	Q8WXE1	791 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	APPBP2	Q92624	585 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	RBM33	Q96EV2	1170 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	KAZALD1	Q96I82	304 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	GDAP1L1	Q96MZ0	367 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	LRRC2	Q9BYS8	371 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120	NSRP1	Q9H0G5	558 aa	Known RBP	11.3	□□□□□ -0.6
UBC-213	ENST00000546120	CD248	Q9HCU0	757 aa		11.3	□□□□□ -0.6
UBC-213	ENST00000546120		A0A0G2JS52	829 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	TRIM75P	A6NK02	468 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	NEURL1B	A8MQ27	555 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120		E7EVH7	732 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	PDLIM1	O00151	329 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	WFS1	O76024	890 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	SCTR	P47872	440 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	RFX5	P48382	616 aa	Predicted RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	UBXN1	Q04323	297 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	PDCL	Q13371	301 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	BIRC2	Q13490	618 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF268	Q14587	947 aa	Predicted RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	CDC37	Q16543	378 aa	Predicted RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	TTMP	Q5BVD1	217 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	RIC3	Q7Z5B4	369 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	ANKLE2	Q86XL3	938 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	NECTIN2	Q92692	538 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	PAGE5	Q96GU1	130 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	CALR3	Q96L12	384 aa	Known RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	CCDC42	Q96M95	316 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	ZIM3	Q96PE6	472 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	SEC62	Q99442	399 aa	Known RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	CUEDC2	Q9H467	287 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	TMBIM4	Q9HC24	238 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms