RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 C1orf167Q5SNV9 1468 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 DISP2A7MBM2 1401 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 ZNF185O15231 689 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
SRP54-202ENST00000546080 IDEP14735 1019 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
SRP54-202ENST00000546080 GBP6Q6ZN66 633 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 LPIN2Q92539 896 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 MTRQ99707 1265 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 CAPS2Q9BXY5 557 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 ZNHIT6Q9NWK9 470 aaKnown RBP15.92■□□□□ 0.14
SRP54-202ENST00000546080 FAM169AQ9Y6X4 670 aa15.92■□□□□ 0.14
SRP54-202ENST00000546080 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 TRIM49BA6NDI0 452 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 LIG3P49916 1009 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 MCTP2Q6DN12 878 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 BCAS4Q8TDM0 211 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
SRP54-202ENST00000546080 AENQ8WTP8 325 aaKnown RBP15.91■□□□□ 0.14
SRP54-202ENST00000546080 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
SRP54-202ENST00000546080 V9GY48 417 aaPredicted RBP15.91■□□□□ 0.14
SRP54-202ENST00000546080 PDS5AQ29RF7 1337 aaKnown RBP15.91■□□□□ 0.14
SRP54-202ENST00000546080 GOLGA8KD6RF30 607 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
SRP54-202ENST00000546080 GPTP24298 496 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 EEF1GP26641 437 aaKnown RBP15.9■□□□□ 0.14
SRP54-202ENST00000546080 MEA1Q16626 185 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 SND1Q7KZF4 910 aaKnown RBP eCLIP15.9■□□□□ 0.148e-6■□□□□ 9.2
SRP54-202ENST00000546080 IRF2BP1Q8IU81 584 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 ESR2Q92731 530 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 MAGEC2Q9UBF1 373 aaPredicted RBP15.9■□□□□ 0.14
SRP54-202ENST00000546080 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 EIF3HO15372 352 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■■■■■ 29.2
SRP54-202ENST00000546080 GNGT1P63211 74 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 PPARAQ07869 468 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 RASGRF1Q13972 1273 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 SEC23AQ15436 765 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.9■□□□□ 0.14
SRP54-202ENST00000546080 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
SRP54-202ENST00000546080 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 TNFRSF25Q93038 417 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 NCAPGQ9BPX3 1015 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 LACRTQ9GZZ8 138 aa15.9■□□□□ 0.14
SRP54-202ENST00000546080 MACROD2A1Z1Q3 448 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 PLEKHA8P1O95397 391 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 CATIPQ7Z7H3 387 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 CCDC170Q8IYT3 715 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 NHEJ1Q9H9Q4 299 aaPredicted RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 DOCK2Q92608 1830 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 SLC5A1P13866 664 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 TRIM21P19474 475 aaKnown RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 MCM7P33993 719 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 DNM2P50570 870 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 FUT2Q10981 343 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 ADSSL1Q8N142 457 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 RUBCNQ92622 972 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 SECISBP2LQ93073 1101 aaKnown RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 MYCBPQ99417 103 aaPredicted RBP15.89■□□□□ 0.13
SRP54-202ENST00000546080 THAP9Q9H5L6 903 aa15.89■□□□□ 0.13
SRP54-202ENST00000546080 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
SRP54-202ENST00000546080 OPA1O60313 960 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 FGFR2P21802 821 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 STAT6P42226 847 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 KIF5AQ12840 1032 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
SRP54-202ENST00000546080 NLRP10Q86W26 655 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 ANKRD18AQ8IVF6 992 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 MMGT1Q8N4V1 131 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 KAT2BQ92831 832 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 PURBQ96QR8 312 aaKnown RBP15.88■□□□□ 0.13
SRP54-202ENST00000546080 RUFY1Q96T51 708 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 NUP58Q9BVL2 599 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 EHD4Q9H223 541 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 RABEP2Q9H5N1 569 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 MYH2Q9UKX2 1941 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 GRIN2DO15399 1336 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 SPATA31A3Q5VYP0 1347 aa15.88■□□□□ 0.13
SRP54-202ENST00000546080 B4DLN1 442 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 NPY5RQ15761 445 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 SWT1Q5T5J6 900 aaKnown RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 IFIT1BQ5T764 474 aaKnown RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 CEP89Q96ST8 783 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 HINFPQ9BQA5 517 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 AGPAT5Q9NUQ2 364 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms