RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 JMYQ8N9B5 988 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
CIT-218ENST00000546026 DCPSQ96C86 337 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 PGBD1Q96JS3 809 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 VCPKMTQ9H867 229 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 C6orf50Q9HD87 102 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 NOL7Q9UMY1 257 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 CLIC4Q9Y696 253 aa11.68□□□□□ -0.54
CIT-218ENST00000546026 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
CIT-218ENST00000546026 M0R2N6 131 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 ZBTB5O15062 677 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
CIT-218ENST00000546026 ECE1P42892 770 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 TOB1P50616 345 aaPredicted RBP11.67□□□□□ -0.54
CIT-218ENST00000546026 NAPAP54920 295 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 PTPAQ15257 358 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 ADALQ6DHV7 355 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
CIT-218ENST00000546026 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 BICD2Q8TD16 824 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 CHURC1Q8WUH1 139 aa11.67□□□□□ -0.54
CIT-218ENST00000546026 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
CIT-218ENST00000546026 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 SMCO2A6NFE2 343 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 TMEM232C9JQI7 657 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 RAD21O60216 631 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 BMP15O95972 392 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 SLC16A2P36021 539 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 TRAF1Q13077 416 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 TYW1BQ6NUM6 668 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 KIAA1683Q9H0B3 1180 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 GZF1Q9H116 711 aaPredicted RBP11.66□□□□□ -0.54
CIT-218ENST00000546026 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 PCDHA7Q9UN72 937 aa11.66□□□□□ -0.54
CIT-218ENST00000546026 IQCA1LA6NCM1 817 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 TRIM75PA6NK02 468 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 INPP5BP32019 993 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 EPHX2P34913 555 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 ME1P48163 572 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 NOL9Q5SY16 702 aaKnown RBP11.65□□□□□ -0.54
CIT-218ENST00000546026 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 KRT25Q7Z3Z0 450 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 LPAR1Q92633 364 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 AS3MTQ9HBK9 375 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 TMEM63CQ9P1W3 806 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 FEM1BQ9UK73 627 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
CIT-218ENST00000546026 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
CIT-218ENST00000546026 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 CUTAO60888 179 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 CMA1P23946 247 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 ADCY7P51828 1080 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 STAT2P52630 851 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 MRPL12P52815 198 aaKnown RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 USP14P54578 494 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 ZNF445P59923 1031 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 IKQ13123 557 aaPredicted RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 QRICH1Q2TAL8 776 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 ZSCAN23Q3MJ62 389 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 EARS2Q5JPH6 523 aaKnown RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 COA7Q96BR5 231 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 FEZ1Q99689 392 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 PICK1Q9NRD5 415 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
CIT-218ENST00000546026 PCDHB6Q9Y5E3 794 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 SCN4AP35499 1836 aa11.64□□□□□ -0.55
CIT-218ENST00000546026 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 USP2O75604 605 aaPredicted RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 PTPRAP18433 802 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms