RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 PDE6CP51160 858 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 WHAMMP3Q1A5X7 153 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 PPP2R5CQ13362 524 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 PSMD6Q15008 389 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 LPXNO60711 386 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 LIG4P49917 911 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 CYP2J2P51589 502 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 YARSP54577 528 aaKnown RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 HADHQ16836 314 aaKnown RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 SLC17A8Q8NDX2 589 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 LMBRD1Q9NUN5 540 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 RAB20Q9NX57 234 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 ADCY9O60503 1353 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 KRIT1O00522 736 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 TRIM37O94972 964 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 BIRC2Q13490 618 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 FAM178BQ8IXR5 827 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
CIT-217ENST00000545913 PFDN6O15212 129 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 VPS37BQ9H9H4 285 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 NLRC4Q9NPP4 1024 aa12.86□□□□□ -0.35
CIT-217ENST00000545913 TNNC2P02585 160 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 ERCC3P19447 782 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 GBP7Q8N8V2 638 aaPredicted RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 PTPRTO14522 1441 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 RPS8P62241 208 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 FAM173BQ6P4H8 233 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 ST7Q9NRC1 585 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 DDAH1O94760 285 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 STX2P32856 288 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 ADPGKQ9BRR6 497 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 TECP42680 631 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 CAPN9O14815 690 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 OR52Z1P0C646 297 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 MAN1A1P33908 653 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 KCNK3O14649 394 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 OAS2P29728 719 aaKnown RBP12.85□□□□□ -0.35
CIT-217ENST00000545913 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 RUNDC3BQ96NL0 473 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 NDUFB9Q9Y6M9 179 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 PFKFB1P16118 471 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
CIT-217ENST00000545913 ZNF853P0CG23 659 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 OTUD7BQ6GQQ9 843 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 SPATS2Q86XZ4 545 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 PRR16Q569H4 304 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 VCX3AQ9NNX9 186 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 K7ENM7 598 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 TTC37Q6PGP7 1564 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 LAD1O00515 517 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 ABCB4P21439 1286 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 IFNL3Q8IZI9 196 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
CIT-217ENST00000545913 IPO11Q9UI26 975 aaKnown RBP12.84□□□□□ -0.35
CIT-217ENST00000545913 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms