RNA–Protein interactions for RNA: ENST00000545717.1

DDX11-230, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-230ENST00000545717 CLMNQ96JQ2 1002 aa16.86■□□□□ 0.29
DDX11-230ENST00000545717 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
DDX11-230ENST00000545717 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
DDX11-230ENST00000545717 VAT1LQ9HCJ6 419 aa16.86■□□□□ 0.29
DDX11-230ENST00000545717 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
DDX11-230ENST00000545717 PTPRFP10586 1907 aa16.86■□□□□ 0.29
DDX11-230ENST00000545717 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 FDX1P10109 184 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 FDPSP14324 419 aaKnown RBP16.85■□□□□ 0.29
DDX11-230ENST00000545717 VCAM1P19320 739 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 FSTL1Q12841 308 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDX11-230ENST00000545717 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
DDX11-230ENST00000545717 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
DDX11-230ENST00000545717 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 PROCA1Q8NCQ7 364 aaPredicted RBP16.85■□□□□ 0.29
DDX11-230ENST00000545717 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 SH3GLB2Q9NR46 395 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
DDX11-230ENST00000545717 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 ZBTB5O15062 677 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 SLC16A2P36021 539 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 HUNKP57058 714 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 FMR1Q06787 632 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX11-230ENST00000545717 TTBK2Q6IQ55 1244 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 HEATR3Q7Z4Q2 680 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 PIBF1Q8WXW3 757 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
DDX11-230ENST00000545717 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 KCNH4Q9UQ05 1017 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 PASKQ96RG2 1323 aa16.84■□□□□ 0.29
DDX11-230ENST00000545717 A0A0G2JLL6 359 aaPredicted RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L15C9J2P7 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L13C9JLJ4 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L11C9JVI0 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L18D6R9N7 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L22D6RA61 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L17D6RBQ6 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L19D6RCP7 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L20D6RJB6 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 FLOT1O75955 427 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 ZBTB48P10074 688 aaPredicted RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 CALML3P27482 149 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 GTF2A2P52657 109 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 FOSBP53539 338 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 USP17L24Q0WX57 530 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 CDC37Q16543 378 aaPredicted RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 GADL1Q6ZQY3 521 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 PRRT2Q7Z6L0 340 aaPredicted RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
DDX11-230ENST00000545717 FBXO18Q8NFZ0 1043 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 KIFC2Q96AC6 838 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 PIGSQ96S52 555 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
DDX11-230ENST00000545717 IRF6O14896 467 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 CYTH3O43739 400 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 BRD1O95696 1058 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 CETPP11597 493 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 MCTP1Q6DN14 999 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 GALNT17Q6IS24 598 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 ZSCAN16Q9H4T2 348 aaPredicted RBP16.82■□□□□ 0.28
DDX11-230ENST00000545717 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
DDX11-230ENST00000545717 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
DDX11-230ENST00000545717 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 ZBED4O75132 1171 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 NAPAP54920 295 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 NLRP5P59047 1200 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 PKN1Q16512 942 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 CST9Q5W186 159 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 KRT40Q6A162 431 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
DDX11-230ENST00000545717 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 AMNQ9BXJ7 453 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 GLT8D2Q9H1C3 349 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 BARHL2Q9NY43 387 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
DDX11-230ENST00000545717 TMEM88BA6NKF7 163 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 DTNBO60941 627 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 F13A1P00488 732 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 OSBPP22059 807 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 GNA11P29992 359 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
DDX11-230ENST00000545717 IRX3P78415 501 aaPredicted RBP16.8■□□□□ 0.28
DDX11-230ENST00000545717 COG2Q14746 738 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 RANBP17Q9H2T7 1088 aaKnown RBP16.8■□□□□ 0.28
DDX11-230ENST00000545717 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms