RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PDHXO00330 501 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 GOLIM4O00461 696 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 HLA-DOAP06340 250 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 PDE6AP16499 860 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 ATP5JP18859 108 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 CAP2P40123 477 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 RGS19P49795 217 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 RAB15P59190 212 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 FASTKD5Q7L8L6 764 aaKnown RBP9.29□□□□□ -0.92
SNHG1-223ENST00000545440 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 CD99L2Q8TCZ2 262 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 DNAJC2Q99543 621 aaKnown RBP9.29□□□□□ -0.92
SNHG1-223ENST00000545440 RIOK1Q9BRS2 568 aaKnown RBP9.29□□□□□ -0.92
SNHG1-223ENST00000545440 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 PAG1Q9NWQ8 432 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 SLC45A1Q9Y2W3 748 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 PCDHB11Q9Y5F2 797 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 ZHX2Q9Y6X8 837 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 RLFQ13129 1914 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 COL11A1P12107 1806 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 ATG7O95352 703 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 GNRH1P01148 92 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 ASNSP08243 561 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 RASA1P20936 1047 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 DYNLL1P63167 89 aaKnown RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 LACTBP83111 547 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 NCOA4Q13772 614 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 SLC9C2Q5TAH2 1124 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 FOXP4Q8IVH2 680 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 CRACR2BQ8N4Y2 399 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 HAUS7Q99871 368 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNHG1-223ENST00000545440 EHD4Q9H223 541 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 DCTPP1Q9H773 170 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 GINM1Q9NU53 330 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 PALD1Q9ULE6 856 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
SNHG1-223ENST00000545440 FRMPD3Q5JV73 1810 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 TCRBV5S4A2TA0A5A2 114 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 TRIM75PA6NK02 468 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 WNT7AO00755 349 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 USP5P45974 858 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 SKOR1P84550 965 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 CAP1Q01518 475 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 KIF22Q14807 665 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 B4GALNT3Q6L9W6 998 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 GPAT2Q6NUI2 795 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 C17orf99Q6UX52 265 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 PHTF2Q8N3S3 785 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 RETREG2Q8NC44 543 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 ZNF280CQ8ND82 737 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 GPATCH3Q96I76 525 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 CRNKL1Q9BZJ0 848 aaKnown RBP9.27□□□□□ -0.93
SNHG1-223ENST00000545440 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 AS3MTQ9HBK9 375 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.27□□□□□ -0.93
SNHG1-223ENST00000545440 AGTPBP1Q9UPW5 1226 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 PTPN22Q9Y2R2 807 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 BRCA2P51587 3418 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 ZNF532Q9HCE3 1301 aa9.27□□□□□ -0.93
SNHG1-223ENST00000545440 LAMA4Q16363 1823 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
SNHG1-223ENST00000545440 BCRP11274 1271 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 ADD2P35612 726 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 RRP1BQ14684 758 aaKnown RBP9.26□□□□□ -0.93
SNHG1-223ENST00000545440 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 GADL1Q6ZQY3 521 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 TTC6Q86TZ1 520 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 ARMC5Q96C12 935 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 EDC3Q96F86 508 aaKnown RBP9.26□□□□□ -0.93
SNHG1-223ENST00000545440 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
SNHG1-223ENST00000545440 WDR18Q9BV38 432 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 ECHDC1Q9NTX5 307 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 SAP30BPQ9UHR5 308 aaKnown RBP9.26□□□□□ -0.93
SNHG1-223ENST00000545440 SERPINB13Q9UIV8 391 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 ZBTB21Q9ULJ3 1066 aa9.26□□□□□ -0.93
SNHG1-223ENST00000545440 ZNFX1Q9P2E3 1918 aaKnown RBP9.25□□□□□ -0.93
SNHG1-223ENST00000545440 CYP2C8P10632 490 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 PRMT2P55345 433 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 SOX10P56693 466 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-223ENST00000545440 SPP2Q13103 211 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 NR5A1Q13285 461 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 AAMPQ13685 434 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 UBE3CQ15386 1083 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 TATDN1Q6P1N9 297 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 CCDC84Q86UT8 332 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-223ENST00000545440 LCORLQ8N3X6 602 aa9.25□□□□□ -0.93
SNHG1-223ENST00000545440 SMCR8Q8TEV9 937 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-223ENST00000545440 TRAIPQ9BWF2 469 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms