RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ZBED4O75132 1171 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 CYP2C8P10632 490 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 OAZ1P54368 228 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-221ENST00000544983 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 KCTD1Q719H9 257 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-221ENST00000544983 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 PRDM10Q9NQV6 1147 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 GPHNQ9NQX3 736 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-221ENST00000544983 MORF4L1Q9UBU8 362 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
SNHG1-221ENST00000544983 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-221ENST00000544983 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 VWA5AO00534 786 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 ATP2A1O14983 1001 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
SNHG1-221ENST00000544983 COPB2P35606 906 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 MCM2P49736 904 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 CCNA1P78396 465 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 TRAF1Q13077 416 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 ARHGEF6Q15052 776 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 SYDE2Q5VT97 1194 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 GPRC5AQ8NFJ5 357 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 NUP133Q8WUM0 1156 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 GPCPD1Q9NPB8 672 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 NID2Q14112 1375 aa13.68□□□□□ -0.22
SNHG1-221ENST00000544983 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 BCRP11274 1271 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 RGS19P49795 217 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
SNHG1-221ENST00000544983 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 RTN1Q16799 776 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 KIFC2Q96AC6 838 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 ATG4CQ96DT6 458 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
SNHG1-221ENST00000544983 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 RLFQ13129 1914 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 GPR25O00155 361 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 SLC25A27O95847 323 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 PDIA3P30101 505 aaKnown RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 AK2P54819 239 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 ERVK-24P63145 666 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 SP3Q02447 781 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 KIF22Q14807 665 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 ZSCAN31Q96LW9 406 aaPredicted RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 TEX13BQ9BXU2 312 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 RANBP17Q9H2T7 1088 aaKnown RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
SNHG1-221ENST00000544983 LIMCH1Q9UPQ0 1083 aa13.66□□□□□ -0.22
SNHG1-221ENST00000544983 PARP14Q460N5 1801 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 GNRH1P01148 92 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 GOLGA8HP0CJ92 632 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 MAPK4P31152 587 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 TTBK2Q6IQ55 1244 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 TMTC3Q6ZXV5 915 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 MAF1Q9H063 256 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
SNHG1-221ENST00000544983 FKTNO75072 461 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 CDKL5O76039 1030 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 ICAM1P05362 532 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 SLC16A2P36021 539 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 STAT3P40763 770 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
SNHG1-221ENST00000544983 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 PAGR1Q9BTK6 254 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-221ENST00000544983 MROH8Q9H579 483 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-221ENST00000544983 CPA4Q9UI42 421 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-221ENST00000544983 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
SNHG1-221ENST00000544983 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 CPLX1O14810 134 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms