RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PDHBP11177 359 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 STAT3P40763 770 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 GRB14Q14449 540 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 RIOX2Q8IUF8 465 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 NCOA7Q8NI08 942 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 CHURC1Q8WUH1 139 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 TEX13BQ9BXU2 312 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 MROH8Q9H579 483 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 BIN2Q9UBW5 565 aaPredicted RBP25.59■■□□□ 1.69
OTUB1-212ENST00000543988 CENPFP49454 3210 aa25.59■■□□□ 1.69
OTUB1-212ENST00000543988 FRMPD2Q68DX3 1309 aaPredicted RBP25.59■■□□□ 1.69
OTUB1-212ENST00000543988 PLXNB2O15031 1838 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 PLA2G6O60733 806 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 ZBED4O75132 1171 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 INHAP05111 366 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 SNHG28P0DPA3 235 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 RGS2P41220 211 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 NECTIN1Q15223 517 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 SNRNP48Q6IEG0 339 aaKnown RBP25.58■■□□□ 1.69
OTUB1-212ENST00000543988 PNMA1Q8ND90 353 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 APBA2Q99767 749 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 KAT14Q9H8E8 782 aa25.58■■□□□ 1.69
OTUB1-212ENST00000543988 SLC25A27O95847 323 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 ZNF543Q08ER8 600 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 MAP2K5Q13163 448 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 MTFR1Q15390 333 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 SEC23AQ15436 765 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 TTBK2Q6IQ55 1244 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 MB21D2Q8IYB1 491 aaPredicted RBP25.57■■□□□ 1.68
OTUB1-212ENST00000543988 RAVER2Q9HCJ3 691 aaKnown RBP25.57■■□□□ 1.68
OTUB1-212ENST00000543988 GPCPD1Q9NPB8 672 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 CTDP1Q9Y5B0 961 aaPredicted RBP25.57■■□□□ 1.68
OTUB1-212ENST00000543988 DOCK3Q8IZD9 2030 aa25.57■■□□□ 1.68
OTUB1-212ENST00000543988 ATP2A1O14983 1001 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 XRCC5P13010 732 aaKnown RBP25.56■■□□□ 1.68
OTUB1-212ENST00000543988 SLC16A2P36021 539 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 ANTXR2P58335 489 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 CPXCR1Q8N123 301 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 TRIB2Q92519 343 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 PRR12Q9ULL5 1215 aa25.56■■□□□ 1.68
OTUB1-212ENST00000543988 HMGCRP04035 888 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 ADORA2AP29274 412 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 COL9A3Q14050 684 aaPredicted RBP25.55■■□□□ 1.68
OTUB1-212ENST00000543988 CCL14Q16627 93 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 IFIT1BQ5T764 474 aaKnown RBP25.55■■□□□ 1.68
OTUB1-212ENST00000543988 BTNL9Q6UXG8 535 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 CHST3Q7LGC8 479 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 RIPK3Q9Y572 518 aa25.55■■□□□ 1.68
OTUB1-212ENST00000543988 COL11A1P12107 1806 aaPredicted RBP25.54■■□□□ 1.68
OTUB1-212ENST00000543988 POTEFA5A3E0 1075 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 STRNO43815 780 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 ZKSCAN1P17029 563 aaPredicted RBP25.54■■□□□ 1.68
OTUB1-212ENST00000543988 COPB2P35606 906 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 SNAP25P60880 206 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 UBXN2AP68543 259 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 TRIM32Q13049 653 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 SYDE2Q5VT97 1194 aa25.54■■□□□ 1.68
OTUB1-212ENST00000543988 IFIT3O14879 490 aaKnown RBP25.53■■□□□ 1.68
OTUB1-212ENST00000543988 HOXC6P09630 235 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 GOLGA8HP0CJ92 632 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 FDX1P10109 184 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 CCL5P13501 91 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 OAZ1P54368 228 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 ABRAQ8N0Z2 381 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 SENP2Q9HC62 589 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 ZNF536O15090 1300 aa25.53■■□□□ 1.68
OTUB1-212ENST00000543988 ZNF236Q9UL36 1845 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 FCER1AP12319 257 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 SLC4A3P48751 1232 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 RNF20Q5VTR2 975 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 CCDC174Q6PII3 467 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 MMP19Q99542 508 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 TMEM106CQ9BVX2 250 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 UNC93B1Q9H1C4 597 aa25.52■■□□□ 1.68
OTUB1-212ENST00000543988 COBLO75128 1261 aa25.51■■□□□ 1.67
OTUB1-212ENST00000543988 TMEM67Q5HYA8 995 aa25.51■■□□□ 1.67
OTUB1-212ENST00000543988 GPATCH4Q5T3I0 446 aaKnown RBP25.51■■□□□ 1.67
OTUB1-212ENST00000543988 TRMT44Q8IYL2 757 aaKnown RBP25.51■■□□□ 1.67
OTUB1-212ENST00000543988 NPLOC4Q8TAT6 608 aa25.51■■□□□ 1.67
OTUB1-212ENST00000543988 AGBL1Q96MI9 1066 aa25.51■■□□□ 1.67
OTUB1-212ENST00000543988 RANBP17Q9H2T7 1088 aaKnown RBP25.51■■□□□ 1.67
OTUB1-212ENST00000543988 FLRT1Q9NZU1 646 aa25.51■■□□□ 1.67
OTUB1-212ENST00000543988 ERICH2A1L162 156 aa25.5■■□□□ 1.67
OTUB1-212ENST00000543988 PRC1O43663 620 aa25.5■■□□□ 1.67
OTUB1-212ENST00000543988 SART3Q15020 963 aaKnown RBP25.5■■□□□ 1.67
OTUB1-212ENST00000543988 DPP9Q86TI2 863 aa25.5■■□□□ 1.67
OTUB1-212ENST00000543988 RASEFQ8IZ41 740 aa25.5■■□□□ 1.67
OTUB1-212ENST00000543988 CPVLQ9H3G5 476 aa25.5■■□□□ 1.67
OTUB1-212ENST00000543988 GPHNQ9NQX3 736 aaPredicted RBP25.5■■□□□ 1.67
OTUB1-212ENST00000543988 TAL1P17542 331 aaPredicted RBP25.49■■□□□ 1.67
OTUB1-212ENST00000543988 KCTD2Q14681 263 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 WTAPQ15007 396 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 ASPRV1Q53RT3 343 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 IGDCC4Q8TDY8 1250 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 RNF208Q9H0X6 261 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 HOMER2Q9NSB8 354 aa25.49■■□□□ 1.67
OTUB1-212ENST00000543988 KIAA0100Q14667 2235 aaKnown RBP25.48■■□□□ 1.67
OTUB1-212ENST00000543988 REC8O95072 547 aa25.48■■□□□ 1.67
OTUB1-212ENST00000543988 PGK2P07205 417 aa25.48■■□□□ 1.67
OTUB1-212ENST00000543988 PRKAR2AP13861 404 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms