RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ZBED4O75132 1171 aa27.04■■□□□ 1.92
CDKN3-207ENST00000543789 APPBP2Q92624 585 aa27.04■■□□□ 1.92
CDKN3-207ENST00000543789 LENG1Q96BZ8 264 aaPredicted RBP27.04■■□□□ 1.92
CDKN3-207ENST00000543789 FAM184BQ9ULE4 1060 aa27.04■■□□□ 1.92
CDKN3-207ENST00000543789 ATP2A1O14983 1001 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 KIAA0355O15063 1070 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 RNF113AO15541 343 aaKnown RBP27.03■■□□□ 1.92
CDKN3-207ENST00000543789 ADAMTS4O75173 837 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 SNAI1O95863 264 aaPredicted RBP27.03■■□□□ 1.92
CDKN3-207ENST00000543789 RAG1P15918 1043 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 SLC4A3P48751 1232 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 C20orf194Q5TEA3 1177 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 MAMDC4Q6UXC1 1216 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 ZNF444Q8N0Y2 327 aaPredicted RBP27.03■■□□□ 1.92
CDKN3-207ENST00000543789 GPATCH3Q96I76 525 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 SYNGAP1Q96PV0 1343 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 ZNF287Q9HBT7 754 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 TMEM39AQ9NV64 488 aa27.03■■□□□ 1.92
CDKN3-207ENST00000543789 CTDP1Q9Y5B0 961 aaPredicted RBP27.03■■□□□ 1.92
CDKN3-207ENST00000543789 DNAJC25-GNG10A0A024R161 153 aa27.02■■□□□ 1.92
CDKN3-207ENST00000543789 CPXCR1Q8N123 301 aa27.02■■□□□ 1.92
CDKN3-207ENST00000543789 NUP133Q8WUM0 1156 aa27.02■■□□□ 1.92
CDKN3-207ENST00000543789 COL25A1Q9BXS0 654 aaPredicted RBP27.02■■□□□ 1.92
CDKN3-207ENST00000543789 BAZ2AQ9UIF9 1905 aaKnown RBP27.02■■□□□ 1.92
CDKN3-207ENST00000543789 IGKV6D-41A0A0C4DH26 115 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 GNAT2P19087 354 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 ACLYP53396 1101 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 ANKRD33Q7Z3H0 272 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 KLHDC9Q8NEP7 349 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 MKL1Q969V6 931 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 TOX2Q96NM4 488 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 STARD7Q9NQZ5 370 aa27.01■■□□□ 1.91
CDKN3-207ENST00000543789 MOXD2PA6NHM9 499 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 GPAA1O43292 621 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 APPP05067 770 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 ZFYP08048 801 aaPredicted RBP27■■□□□ 1.91
CDKN3-207ENST00000543789 TDO2P48775 406 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 EPHB4P54760 987 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 ZNF467Q7Z7K2 595 aaPredicted RBP27■■□□□ 1.91
CDKN3-207ENST00000543789 KIFC2Q96AC6 838 aa27■■□□□ 1.91
CDKN3-207ENST00000543789 RNPC3Q96LT9 517 aaKnown RBP27■■□□□ 1.91
CDKN3-207ENST00000543789 RAVER2Q9HCJ3 691 aaKnown RBP27■■□□□ 1.91
CDKN3-207ENST00000543789 ZHX1Q9UKY1 873 aaPredicted RBP27■■□□□ 1.91
CDKN3-207ENST00000543789 SYNRGQ9UMZ2 1314 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 DCDC2CA8MYV0 355 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 DUSP11O75319 330 aaKnown RBP26.99■■□□□ 1.91
CDKN3-207ENST00000543789 FAAP100Q0VG06 881 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 KCNA10Q16322 511 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 TTYH1Q9H313 450 aaPredicted RBP26.99■■□□□ 1.91
CDKN3-207ENST00000543789 DCTPP1Q9H773 170 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 SLC38A10Q9HBR0 1119 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 EPB41L4AQ9HCS5 686 aaPredicted RBP26.99■■□□□ 1.91
CDKN3-207ENST00000543789 MTMR4Q9NYA4 1195 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 FEM1BQ9UK73 627 aa26.99■■□□□ 1.91
CDKN3-207ENST00000543789 LTBP2Q14767 1821 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 PATL2C9JE40 543 aaKnown RBP26.98■■□□□ 1.91
CDKN3-207ENST00000543789 PRDM1O75626 825 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 ACVR2BQ13705 512 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 TSHZ3Q63HK5 1081 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 CCSAPQ6IQ19 270 aaPredicted RBP26.98■■□□□ 1.91
CDKN3-207ENST00000543789 ANKRD35Q8N283 1001 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 CEP95Q96GE4 821 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 SYNPO2Q9UMS6 1093 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 CUL9Q8IWT3 2517 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 UNC80Q8N2C7 3258 aa26.98■■□□□ 1.91
CDKN3-207ENST00000543789 TTLL1O95922 423 aa26.97■■□□□ 1.91
CDKN3-207ENST00000543789 FPGSQ05932 587 aa26.97■■□□□ 1.91
CDKN3-207ENST00000543789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.97■■□□□ 1.91
CDKN3-207ENST00000543789 CHST13Q8NET6 341 aa26.97■■□□□ 1.91
CDKN3-207ENST00000543789 MAFAQ8NHW3 353 aaPredicted RBP26.97■■□□□ 1.91
CDKN3-207ENST00000543789 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.97■■□□□ 1.91
CDKN3-207ENST00000543789 FBXO40Q9UH90 709 aa26.97■■□□□ 1.91
CDKN3-207ENST00000543789 MYH8P13535 1937 aa26.96■■□□□ 1.91
CDKN3-207ENST00000543789 M0R2C6 588 aa26.96■■□□□ 1.91
CDKN3-207ENST00000543789 LRRFIP1Q32MZ4 808 aaKnown RBP26.96■■□□□ 1.91
CDKN3-207ENST00000543789 GMCL1P1Q8NEA9 526 aa26.96■■□□□ 1.91
CDKN3-207ENST00000543789 MYLIPQ8WY64 445 aa26.96■■□□□ 1.91
CDKN3-207ENST00000543789 ABHD16BQ9H3Z7 469 aa26.96■■□□□ 1.91
CDKN3-207ENST00000543789 SMCHD1A6NHR9 2005 aa26.95■■□□□ 1.91
CDKN3-207ENST00000543789 OAZ1P54368 228 aa26.95■■□□□ 1.9
CDKN3-207ENST00000543789 IFNL3Q8IZI9 196 aa26.95■■□□□ 1.9
CDKN3-207ENST00000543789 LRRC47Q8N1G4 583 aaKnown RBP26.95■■□□□ 1.9
CDKN3-207ENST00000543789 PCSK9Q8NBP7 692 aaKnown RBP26.95■■□□□ 1.9
CDKN3-207ENST00000543789 GLT1D1Q96MS3 346 aa26.95■■□□□ 1.9
CDKN3-207ENST00000543789 SPC25Q9HBM1 224 aa26.95■■□□□ 1.9
CDKN3-207ENST00000543789 PARP14Q460N5 1801 aa26.95■■□□□ 1.9
CDKN3-207ENST00000543789 ELP1O95163 1332 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 TMEM265A0A087WTH1 108 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 MYADML2A6NDP7 307 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 TIMP1P01033 207 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 CST5P28325 142 aaPredicted RBP26.94■■□□□ 1.9
CDKN3-207ENST00000543789 SLFN13Q68D06 897 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 VTI1AQ96AJ9 217 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 NACAP1Q9BZK3 213 aa26.94■■□□□ 1.9
CDKN3-207ENST00000543789 ZNFX1Q9P2E3 1918 aaKnown RBP26.94■■□□□ 1.9
CDKN3-207ENST00000543789 C6orf222P0C671 652 aaPredicted RBP26.93■■□□□ 1.9
CDKN3-207ENST00000543789 TSPY3P0CV98 308 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 TSPY8P0CW00 308 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 FDX1P10109 184 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 BMP3P12645 472 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms