RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 MCM2P49736 904 aa14.19□□□□□ -0.14
DDX55-210ENST00000543016 TOB2Q14106 344 aaPredicted RBP14.19□□□□□ -0.14
DDX55-210ENST00000543016 KCTD1Q719H9 257 aa14.19□□□□□ -0.14
DDX55-210ENST00000543016 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
DDX55-210ENST00000543016 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
DDX55-210ENST00000543016 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
DDX55-210ENST00000543016 ISY1Q9ULR0 285 aaKnown RBP14.19□□□□□ -0.14
DDX55-210ENST00000543016 RABGAP1Q9Y3P9 1069 aa14.19□□□□□ -0.14
DDX55-210ENST00000543016 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
DDX55-210ENST00000543016 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 ZBED4O75132 1171 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 TRPA1O75762 1119 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 CYP2C8P10632 490 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 COPB2P35606 906 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 OAZ1P54368 228 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 TRAF1Q13077 416 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 IKQ13123 557 aaPredicted RBP14.18□□□□□ -0.14
DDX55-210ENST00000543016 CRHR2Q13324 411 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 FAM110CQ1W6H9 321 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 SYDE2Q5VT97 1194 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 MORF4L1Q9UBU8 362 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 BRPF3Q9ULD4 1205 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 MTMR7Q9Y216 660 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 CTDP1Q9Y5B0 961 aaPredicted RBP14.18□□□□□ -0.14
DDX55-210ENST00000543016 NID2Q14112 1375 aa14.18□□□□□ -0.14
DDX55-210ENST00000543016 ADGRA2Q96PE1 1338 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 VWA5AO00534 786 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 ATP2A1O14983 1001 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
DDX55-210ENST00000543016 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX55-210ENST00000543016 AK2P54819 239 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 CCNA1P78396 465 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 APOBRQ0VD83 1088 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 RTN1Q16799 776 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 MICU3Q86XE3 530 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 GPRC5AQ8NFJ5 357 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 ZSCAN31Q96LW9 406 aaPredicted RBP14.17□□□□□ -0.14
DDX55-210ENST00000543016 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 FBXO28Q9NVF7 368 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 PRR12Q9ULL5 1215 aa14.17□□□□□ -0.14
DDX55-210ENST00000543016 FRMPD2Q68DX3 1309 aaPredicted RBP14.16□□□□□ -0.14
DDX55-210ENST00000543016 GOLGA8AA7E2F4 631 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 GOLGA8BA8MQT2 603 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 BCRP11274 1271 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
DDX55-210ENST00000543016 ARHGEF6Q15052 776 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 CPLX2Q6PUV4 134 aaKnown RBP14.16□□□□□ -0.14
DDX55-210ENST00000543016 ATG4CQ96DT6 458 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 SPZ1Q9BXG8 430 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 RIOX1Q9H6W3 641 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
DDX55-210ENST00000543016 RBPJLQ9UBG7 517 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 NAP1L2Q9ULW6 460 aaPredicted RBP14.16□□□□□ -0.14
DDX55-210ENST00000543016 LIMCH1Q9UPQ0 1083 aa14.16□□□□□ -0.14
DDX55-210ENST00000543016 SLC25A27O95847 323 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 GOLGA8HP0CJ92 632 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 TTBK2Q6IQ55 1244 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 TMTC3Q6ZXV5 915 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 SHCBP1Q8NEM2 672 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 MYL10Q9BUA6 226 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 MAF1Q9H063 256 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 SLKQ9H2G2 1235 aaPredicted RBP14.15□□□□□ -0.14
DDX55-210ENST00000543016 RANBP17Q9H2T7 1088 aaKnown RBP14.15□□□□□ -0.14
DDX55-210ENST00000543016 SH2B1Q9NRF2 756 aaPredicted RBP14.15□□□□□ -0.14
DDX55-210ENST00000543016 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
DDX55-210ENST00000543016 GPR25O00155 361 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 PFKFB2O60825 505 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 CDKL5O76039 1030 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 TBC1D8O95759 1140 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 ERVK-24P63145 666 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 TKFCQ3LXA3 575 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 ADGRF4Q8IZF3 695 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 REPS2Q8NFH8 660 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 MTMR8Q96EF0 704 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 TEX13BQ9BXU2 312 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 TPCN1Q9ULQ1 816 aa14.14□□□□□ -0.15
DDX55-210ENST00000543016 CPLX1O14810 134 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 FKTNO75072 461 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 GNRH1P01148 92 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 ICAM1P05362 532 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 SLC16A2P36021 539 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 STAT3P40763 770 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 CTCFP49711 727 aaPredicted RBP14.13□□□□□ -0.15
DDX55-210ENST00000543016 SP3Q02447 781 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 KIF22Q14807 665 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 RASGRP2Q7LDG7 609 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 RIOX2Q8IUF8 465 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 RRP36Q96EU6 259 aaKnown RBP14.13□□□□□ -0.15
DDX55-210ENST00000543016 ERO1AQ96HE7 468 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 PAGR1Q9BTK6 254 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 UBA5Q9GZZ9 404 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 SPATC1LQ9H0A9 340 aa14.13□□□□□ -0.15
DDX55-210ENST00000543016 MROH8Q9H579 483 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms