RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
CHFR-221ENST00000542714 BARHL2Q9NY43 387 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 RLFQ13129 1914 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 SMCHD1A6NHR9 2005 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 PTMSP20962 102 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 KRT2P35908 639 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 PRKG1Q13976 671 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 SAFBQ15424 915 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHFR-221ENST00000542714 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 SYDE2Q5VT97 1194 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.28■□□□□ 0.04
CHFR-221ENST00000542714 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
CHFR-221ENST00000542714 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 KIAA1683Q9H0B3 1180 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 SEC63Q9UGP8 760 aaKnown RBP15.28■□□□□ 0.04
CHFR-221ENST00000542714 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
CHFR-221ENST00000542714 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 LOC285556D6RIA3 1793 aa15.28■□□□□ 0.04
CHFR-221ENST00000542714 UTRNP46939 3433 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 TMEM232C9JQI7 657 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 GADD45BO75293 160 aaPredicted RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 NLRP5P59047 1200 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 DGKZQ13574 1117 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 EARS2Q5JPH6 523 aaKnown RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 ATL3Q6DD88 541 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 FAM177A1Q8N128 213 aaPredicted RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 LEO1Q8WVC0 666 aaPredicted RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
CHFR-221ENST00000542714 FEZ1Q99689 392 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 RRAGCQ9HB90 399 aa15.27■□□□□ 0.04
CHFR-221ENST00000542714 ELP1O95163 1332 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 hCG_1984214I3L0E3 225 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 M0R2N6 131 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 ZBTB5O15062 677 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
CHFR-221ENST00000542714 NAPAP54920 295 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 MTMR2Q13614 643 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 GNL2Q13823 731 aaKnown RBP15.26■□□□□ 0.03
CHFR-221ENST00000542714 VGLL4Q14135 290 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 CDC37Q16543 378 aaPredicted RBP15.26■□□□□ 0.03
CHFR-221ENST00000542714 QRICH1Q2TAL8 776 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 ZNF713Q8N859 430 aaPredicted RBP15.26■□□□□ 0.03
CHFR-221ENST00000542714 CCDC148Q8NFR7 591 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 COA7Q96BR5 231 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 RTEL1Q9NZ71 1219 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 PRR12Q9ULL5 1215 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 CLIC4Q9Y696 253 aa15.26■□□□□ 0.03
CHFR-221ENST00000542714 COL11A1P12107 1806 aaPredicted RBP15.25■□□□□ 0.03
CHFR-221ENST00000542714 ESYT2A0FGR8 921 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 TRAK2O60296 914 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 PLA2G6O60733 806 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 CALML3P27482 149 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 NASPP49321 788 aaPredicted RBP15.25■□□□□ 0.03
CHFR-221ENST00000542714 SNAP25P60880 206 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
CHFR-221ENST00000542714 SPP2Q13103 211 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
CHFR-221ENST00000542714 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 SCAND2PQ9GZW5 306 aaPredicted RBP15.25■□□□□ 0.03
CHFR-221ENST00000542714 ZMYND12Q9H0C1 365 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 AS3MTQ9HBK9 375 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
CHFR-221ENST00000542714 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
CHFR-221ENST00000542714 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
CHFR-221ENST00000542714 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 GALNT17Q6IS24 598 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 PPP1R18Q6NYC8 613 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 LPAR1Q92633 364 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 POLR3EQ9NVU0 708 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 CFAP45Q9UL16 551 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 AFG3L2Q9Y4W6 797 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 ZHX2Q9Y6X8 837 aa15.24■□□□□ 0.03
CHFR-221ENST00000542714 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 TRAF5O00463 557 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
CHFR-221ENST00000542714 VCAM1P19320 739 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 IREB2P48200 963 aaKnown RBP15.23■□□□□ 0.03
CHFR-221ENST00000542714 STAT2P52630 851 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 BACE1P56817 501 aa15.23■□□□□ 0.03
CHFR-221ENST00000542714 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHFR-221ENST00000542714 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms