RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ETV2O00321 342 aaPredicted RBP8.07□□□□□ -1.12
XRCC4-206ENST00000542685 ACRP10323 421 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 CFPP27918 469 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 SNX17Q15036 470 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 SLC14A2Q15849 920 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 BBS9Q3SYG4 887 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 ATG14Q6ZNE5 492 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 CILP2Q8IUL8 1156 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 SLC26A8Q96RN1 970 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 PCDHB12Q9Y5F1 795 aa8.07□□□□□ -1.12
XRCC4-206ENST00000542685 NOTOA8MTQ0 251 aa8.06□□□□□ -1.12
XRCC4-206ENST00000542685 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
XRCC4-206ENST00000542685 AUHQ13825 339 aaKnown RBP8.06□□□□□ -1.12
XRCC4-206ENST00000542685 IRF2BP1Q8IU81 584 aa8.06□□□□□ -1.12
XRCC4-206ENST00000542685 LRRC56Q8IYG6 542 aaPredicted RBP8.06□□□□□ -1.12
XRCC4-206ENST00000542685 SHISA4Q96DD7 197 aa8.06□□□□□ -1.12
XRCC4-206ENST00000542685 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 EFEMP2O95967 443 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 IMPDH2P12268 514 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
XRCC4-206ENST00000542685 CEP128Q6ZU80 1094 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 HHIPL1Q96JK4 782 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 DHRS1Q96LJ7 313 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 SUCOQ9UBS9 1254 aaKnown RBP8.05□□□□□ -1.12
XRCC4-206ENST00000542685 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
XRCC4-206ENST00000542685 PPT2Q9UMR5 302 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 MROH2BQ7Z745 1585 aa8.05□□□□□ -1.12
XRCC4-206ENST00000542685 TOP2AP11388 1531 aaKnown RBP8.04□□□□□ -1.12
XRCC4-206ENST00000542685 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
XRCC4-206ENST00000542685 C9IYK1 514 aa8.04□□□□□ -1.12
XRCC4-206ENST00000542685 RECKO95980 971 aa8.04□□□□□ -1.12
XRCC4-206ENST00000542685 TDRD10Q5VZ19 366 aaKnown RBP8.04□□□□□ -1.12
XRCC4-206ENST00000542685 SPOCD1Q6ZMY3 1216 aa8.04□□□□□ -1.12
XRCC4-206ENST00000542685 ZSCAN18Q8TBC5 510 aaPredicted RBP8.04□□□□□ -1.12
XRCC4-206ENST00000542685 WIZO95785 1651 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 SCAMP3O14828 347 aaKnown RBP8.03□□□□□ -1.12
XRCC4-206ENST00000542685 GLDCP23378 1020 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 CTSKP43235 329 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 KIR2DL1P43626 348 aaPredicted RBP8.03□□□□□ -1.12
XRCC4-206ENST00000542685 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
XRCC4-206ENST00000542685 KCNA10Q16322 511 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 ADGRF1Q5T601 910 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 TMEM132EQ6IEE7 984 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 NLRX1Q86UT6 975 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 CDADC1Q9BWV3 514 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 MCOLN1Q9GZU1 580 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
XRCC4-206ENST00000542685 NRDCO43847 1150 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 RTP1P59025 263 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 GLIPR1L2Q4G1C9 344 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 RUFY4Q6ZNE9 571 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 C7orf61Q8IZ16 206 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 TM9SF2Q99805 663 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 DSCC1Q9BVC3 393 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 ZNF552Q9H707 407 aaPredicted RBP8.02□□□□□ -1.13
XRCC4-206ENST00000542685 FAM86C1Q9NVL1 165 aa8.02□□□□□ -1.13
XRCC4-206ENST00000542685 SMG5Q9UPR3 1016 aaKnown RBP8.02□□□□□ -1.13
XRCC4-206ENST00000542685 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 OR14I1A6ND48 311 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 BMP8BP34820 402 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 PMS1P54277 932 aaKnown RBP8.01□□□□□ -1.13
XRCC4-206ENST00000542685 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
XRCC4-206ENST00000542685 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 C1QL4Q86Z23 238 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 ZNF654Q8IZM8 581 aa8.01□□□□□ -1.13
XRCC4-206ENST00000542685 FCRL2Q96LA5 508 aaPredicted RBP8.01□□□□□ -1.13
XRCC4-206ENST00000542685 TP53P04637 393 aaPredicted RBP8□□□□□ -1.13
XRCC4-206ENST00000542685 ZSCAN22P10073 491 aaPredicted RBP8□□□□□ -1.13
XRCC4-206ENST00000542685 VAV1P15498 845 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 SDHBP21912 280 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 VAMP1P23763 118 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 PAK2Q13177 524 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 DCAF15Q66K64 600 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 CCDC81Q6ZN84 652 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 LCNL1Q6ZST4 164 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 PPFIBP1Q86W92 1011 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 TAB3Q8N5C8 712 aaPredicted RBP8□□□□□ -1.13
XRCC4-206ENST00000542685 PLCD4Q9BRC7 762 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 SGPP1Q9BX95 441 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 TNFRSF10DQ9UBN6 386 aa8□□□□□ -1.13
XRCC4-206ENST00000542685 GPR55Q9Y2T6 319 aaPredicted RBP8□□□□□ -1.13
XRCC4-206ENST00000542685 TNIKQ9UKE5 1360 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 SHOXO15266 292 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 PEX10O60683 326 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 ZNF205O95201 554 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 GUCY2CP25092 1073 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 DLG4P78352 724 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 NOL9Q5SY16 702 aaKnown RBP7.99□□□□□ -1.13
XRCC4-206ENST00000542685 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
XRCC4-206ENST00000542685 UNC5AQ6ZN44 842 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 GINM1Q9NU53 330 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
XRCC4-206ENST00000542685 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms