RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 EPN1Q9Y6I3 576 aaPredicted RBP17.98■□□□□ 0.47
VARS2-212ENST00000542001 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 KLHL7Q8IXQ5 586 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 HPS3Q969F9 1004 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 FUCA2Q9BTY2 467 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 PCDHB13Q9Y5F0 798 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 PSDA5PKW4 1024 aaPredicted RBP17.97■□□□□ 0.47
VARS2-212ENST00000542001 KIF20AO95235 890 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 EHBP1Q8NDI1 1231 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 SH3RF3Q8TEJ3 882 aaPredicted RBP17.97■□□□□ 0.47
VARS2-212ENST00000542001 KANSL2Q9H9L4 492 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 UTYO14607 1347 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 STX10O60499 249 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 NEFHP12036 1026 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 CDC25BP30305 580 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 E4F1Q66K89 784 aaPredicted RBP17.97■□□□□ 0.47
VARS2-212ENST00000542001 ATRIPQ8WXE1 791 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 ERVV-1B6SEH8 477 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 UBE2SQ16763 222 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 KMT5BQ4FZB7 885 aa17.97■□□□□ 0.47
VARS2-212ENST00000542001 GTPBP6O43824 516 aaPredicted RBP17.96■□□□□ 0.47
VARS2-212ENST00000542001 KLRK1P26718 216 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 CKAP4Q07065 602 aaKnown RBP17.96■□□□□ 0.47
VARS2-212ENST00000542001 TBCKQ8TEA7 893 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 CPDO75976 1380 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 PALLDQ8WX93 1383 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 MEGF6O75095 1541 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 OR52Z1P0C646 297 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 SARM1Q6SZW1 724 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 KRT25Q7Z3Z0 450 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 ERMNQ8TAM6 284 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 SMCR8Q8TEV9 937 aaPredicted RBP17.96■□□□□ 0.47
VARS2-212ENST00000542001 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
VARS2-212ENST00000542001 SHTN1A0MZ66 631 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 CNNM4Q6P4Q7 775 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 HDXQ7Z353 690 aa17.96■□□□□ 0.47
VARS2-212ENST00000542001 IFIH1Q9BYX4 1025 aaKnown RBP17.96■□□□□ 0.47
VARS2-212ENST00000542001 DIP2BQ9P265 1576 aa17.96■□□□□ 0.46
VARS2-212ENST00000542001 FAM13AO94988 1023 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 ADAT2Q7Z6V5 191 aaKnown RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 WDR24Q96S15 920 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 CCZ1BP86790 482 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 CCZ1P86791 482 aaPredicted RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 PRR16Q569H4 304 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 CCDC174Q6PII3 467 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 SND1Q7KZF4 910 aaKnown RBP eCLIP17.95■□□□□ 0.46
VARS2-212ENST00000542001 NEK8Q86SG6 692 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 ENOX1Q8TC92 643 aaKnown RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 DCP1AQ9NPI6 582 aaPredicted RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 SORBS3O60504 671 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 KRT31Q15323 416 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 TTC19Q6DKK2 380 aaPredicted RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 ENGASEQ8NFI3 743 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 SECISBP2LQ93073 1101 aaKnown RBP17.95■□□□□ 0.46
VARS2-212ENST00000542001 DBNDD1Q9H9R9 158 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 ATP8A2Q9NTI2 1148 aa17.95■□□□□ 0.46
VARS2-212ENST00000542001 MEIS1O00470 390 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 SRGAP2O75044 1071 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
VARS2-212ENST00000542001 GSDMAQ96QA5 445 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.94■□□□□ 0.46
VARS2-212ENST00000542001 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 GSTTP1A0A1W2PQM5 241 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 ANKRD65E5RJM6 399 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 TUBB4AP04350 444 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 CDCA7Q9BWT1 371 aaPredicted RBP17.94■□□□□ 0.46
VARS2-212ENST00000542001 KRT13P13646 458 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 STAG1Q8WVM7 1258 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 PCDHA12Q9UN75 941 aa17.94■□□□□ 0.46
VARS2-212ENST00000542001 PLCG1P19174 1290 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 CCDC65Q8IXS2 484 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 OGFOD1Q8N543 542 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS2-212ENST00000542001 DYDC1Q8WWB3 177 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 CNOT6LQ96LI5 555 aaKnown RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 HSF2BPO75031 334 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 TRIM28Q13263 835 aaKnown RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 NAA15Q9BXJ9 866 aaKnown RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 PARD6BQ9BYG5 372 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 MYO6Q9UM54 1294 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 SAR1BQ9Y6B6 198 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 KDM6AO15550 1401 aaPredicted RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 ZNF710Q8N1W2 664 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
VARS2-212ENST00000542001 CSF1RP07333 972 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 TNIP1Q15025 636 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 TFR2Q9UP52 801 aa17.93■□□□□ 0.46
VARS2-212ENST00000542001 PRPF3O43395 683 aaKnown RBP17.92■□□□□ 0.46
VARS2-212ENST00000542001 GUCY2FP51841 1108 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 TRIML1Q8N9V2 468 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms