RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 HOXA10P31260 410 aaPredicted RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 PDE6BP35913 854 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 POSTNQ15063 836 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 GSPT2Q8IYD1 628 aaKnown RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 TFR2Q9UP52 801 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 JRKLQ9Y4A0 524 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 LRP5O75197 1615 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 PATL2C9JE40 543 aaKnown RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 CD44P16070 742 aaKnown RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 MAGEA9P43362 315 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 FXR1P51114 621 aaKnown RBP eCLIP10.32□□□□□ -0.76
THBS3-211ENST00000541990 E2F4Q16254 413 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 IGSF22Q8N9C0 903 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 CRAMP1Q96RY5 1269 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 LEMD3Q9Y2U8 911 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 LOC102724159A0A0B4J2E5 919 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 KIF5CO60282 957 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 ZMYND10O75800 440 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 IVLP07476 585 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 CASP14P31944 242 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 PWP2Q15269 919 aaKnown RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 RASGRP2Q7LDG7 609 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 ZNF804AQ7Z570 1209 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 HINFPQ9BQA5 517 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 EHD4Q9H223 541 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 ZSWIM5Q9P217 1185 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 FAM196BA6NMK8 535 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 RNF40O75150 1001 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 RAD17O75943 681 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 SYF2O95926 243 aaKnown RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 METAP2P50579 478 aaKnown RBP eCLIP10.31□□□□□ -0.76
THBS3-211ENST00000541990 TOB1P50616 345 aaPredicted RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 ERVK-24P63145 666 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 RALYLQ86SE5 291 aaKnown RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 SP8Q8IXZ3 490 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 CEP112Q8N8E3 955 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 KCNJ14Q9UNX9 436 aa10.31□□□□□ -0.76
THBS3-211ENST00000541990 CICQ96RK0 1608 aaPredicted RBP10.31□□□□□ -0.76
THBS3-211ENST00000541990 BTBD18B2RXH4 712 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 RPS6KA5O75582 802 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 CORO7P57737 925 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 MORC3Q14149 939 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 ENOX1Q8TC92 643 aaKnown RBP10.3□□□□□ -0.76
THBS3-211ENST00000541990 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 ENC1O14682 589 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 GYPCP04921 128 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76
THBS3-211ENST00000541990 TCP10Q12799 353 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 DPYDQ12882 1025 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 NCOA7Q8NI08 942 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 ZMYM6O95789 1325 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 A0A087X0B3 334 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 CTAGE9A4FU28 777 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 MFAP3LO75121 409 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
THBS3-211ENST00000541990 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
THBS3-211ENST00000541990 SARSP49591 514 aaKnown RBP10.3□□□□□ -0.76
THBS3-211ENST00000541990 PLCD1P51178 756 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 CLEC10AQ8IUN9 316 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 JMYQ8N9B5 988 aa10.3□□□□□ -0.76
THBS3-211ENST00000541990 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
THBS3-211ENST00000541990 ZC3H4Q9UPT8 1303 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 ZNF831Q5JPB2 1677 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 CASZ1Q86V15 1759 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 CTAGE15A4D2H0 777 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 SRGAP2O75044 1071 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 CTAGE8P0CG41 777 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 KCNA3P22001 575 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 BTDP43251 543 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 PPARAQ07869 468 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 NTRK3Q16288 839 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 SHROOM1Q2M3G4 852 aaPredicted RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 CTR9Q6PD62 1173 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 CTAGE6Q86UF2 777 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 CTAGE4Q8IX94 777 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 NLGN2Q8NFZ4 835 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 FAM71BQ8TC56 605 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 KAT2BQ92831 832 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 PANX2Q96RD6 677 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 FBXO2Q9UK22 296 aaPredicted RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 TTF2Q9UNY4 1162 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 PCDHB6Q9Y5E3 794 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 TNS1Q9HBL0 1735 aaKnown RBP10.29□□□□□ -0.76
THBS3-211ENST00000541990 ERLIN1O75477 346 aa10.29□□□□□ -0.76
THBS3-211ENST00000541990 PRPF6O94906 941 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms