RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 KIAA0355O15063 1070 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 AKR1A1P14550 325 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 TAL1P17542 331 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 IGFBP4P22692 258 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 KIAA1755Q5JYT7 1200 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 CLEC10AQ8IUN9 316 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 APPBP2Q92624 585 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 PRDM12Q9H4Q4 367 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
CLSTN3-212ENST00000541770 GRXCR1A8MXD5 290 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 SLC25A27O95847 323 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 CYP2D6P10635 497 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 PBX2P40425 430 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 ICA1Q05084 483 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 FAAP100Q0VG06 881 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 KCTD2Q14681 263 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 ABRAQ8N0Z2 381 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 NUP133Q8WUM0 1156 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 SDR42E1Q8WUS8 393 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 SH2D4AQ9H788 454 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 THEGQ9P2T0 379 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 CNPY2Q9Y2B0 182 aa10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-212ENST00000541770 LAMA2P24043 3122 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 TIMP1P01033 207 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 CHGBP05060 677 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 ACRP10323 421 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 AKR1B1P15121 316 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 ACLYP53396 1101 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 GABPAQ06546 454 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 ZMYM1Q5SVZ6 1142 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 OSBP2Q969R2 916 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 PUS7LQ9H0K6 701 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 VCPKMTQ9H867 229 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-212ENST00000541770 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 MYH7P12883 1935 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 VCANP13611 3396 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 HIP1O00291 1037 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 WDR46O15213 610 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 ZNF865P0CJ78 1059 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 SDSP20132 328 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 STAT3P40763 770 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 PPIGQ13427 754 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 KCNA10Q16322 511 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 ZNF792Q3KQV3 632 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 BMP2KLQ5H9B9 411 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 LCORLQ8N3X6 602 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 ATXN2LQ8WWM7 1075 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 GLT1D1Q96MS3 346 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 ASB2Q96Q27 587 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 UHRF1Q96T88 793 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 HELLSQ9NRZ9 838 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 FBXO28Q9NVF7 368 aa10.35□□□□□ -0.75
CLSTN3-212ENST00000541770 MCM3APO60318 1980 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 GPAA1O43292 621 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 ADAMTS4O75173 837 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 MBD4O95243 580 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 CSF2RAP15509 400 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 GNAT2P19087 354 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 MRPS5P82675 430 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 MFSD5Q6N075 450 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 ANKRD33Q7Z3H0 272 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 RIOX2Q8IUF8 465 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 FAM122AQ96E09 287 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 STRBPQ96SI9 672 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 ARMT1Q9H993 441 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 DCP1AQ9NPI6 582 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 ATP8A2Q9NTI2 1148 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 SWAP70Q9UH65 585 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 MSRAQ9UJ68 235 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 DIS3Q9Y2L1 958 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 TMX2Q9Y320 296 aa10.34□□□□□ -0.75
CLSTN3-212ENST00000541770 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms