RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 TDRD10Q5VZ19 366 aaKnown RBP6.71□□□□□ -1.34
PRKDC-210ENST00000541488 CCDC81Q6ZN84 652 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 WAPLQ7Z5K2 1190 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 USHBP1Q8N6Y0 703 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 CXorf38Q8TB03 319 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 BORCS6Q96GS4 357 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 GFOD1Q9NXC2 390 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 ZMYM5Q9UJ78 669 aa6.71□□□□□ -1.34
PRKDC-210ENST00000541488 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-210ENST00000541488 SYPP08247 313 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 OXR1Q8N573 874 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 PDZD8Q8NEN9 1154 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 DHX38Q92620 1227 aaKnown RBP6.7□□□□□ -1.34
PRKDC-210ENST00000541488 MRRFQ96E11 262 aaKnown RBP6.7□□□□□ -1.34
PRKDC-210ENST00000541488 SLC26A8Q96RN1 970 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 SP110Q9HB58 689 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 METTL5Q9NRN9 209 aaKnown RBP6.7□□□□□ -1.34
PRKDC-210ENST00000541488 TCFL5Q9UL49 500 aa6.7□□□□□ -1.34
PRKDC-210ENST00000541488 MEIS3P2A8K0S8 358 aa6.69□□□□□ -1.34
PRKDC-210ENST00000541488 C9IYK1 514 aa6.69□□□□□ -1.34
PRKDC-210ENST00000541488 ADRB1P08588 477 aa6.69□□□□□ -1.34
PRKDC-210ENST00000541488 ACRP10323 421 aa6.69□□□□□ -1.34
PRKDC-210ENST00000541488 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
PRKDC-210ENST00000541488 SYTL5Q8TDW5 730 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-210ENST00000541488 DDX41Q9UJV9 622 aaKnown RBP6.69□□□□□ -1.34
PRKDC-210ENST00000541488 ZNRF3Q9ULT6 936 aa6.69□□□□□ -1.34
PRKDC-210ENST00000541488 TNFRSF10CO14798 259 aa6.68□□□□□ -1.34
PRKDC-210ENST00000541488 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
PRKDC-210ENST00000541488 RAD51AP2Q09MP3 1159 aa6.68□□□□□ -1.34
PRKDC-210ENST00000541488 PAK2Q13177 524 aa6.68□□□□□ -1.34
PRKDC-210ENST00000541488 DAGLBQ8NCG7 672 aa6.68□□□□□ -1.34
PRKDC-210ENST00000541488 CHST7Q9NS84 486 aa6.68□□□□□ -1.34
PRKDC-210ENST00000541488 FITM1A5D6W6 292 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 SIGLEC6O43699 453 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 TP53P04637 393 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 DUSP4Q13115 394 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 ZYXQ15942 572 aaKnown RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 CCDC144CPQ8IYA2 1237 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 ZNF655Q8N720 491 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 ENOX1Q8TC92 643 aaKnown RBP6.67□□□□□ -1.34
PRKDC-210ENST00000541488 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 PCDHB12Q9Y5F1 795 aa6.67□□□□□ -1.34
PRKDC-210ENST00000541488 UNCXA6NJT0 531 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 TRIM13O60858 407 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 EFEMP2O95967 443 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 PDE6BP35913 854 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 AUHQ13825 339 aaKnown RBP6.66□□□□□ -1.34
PRKDC-210ENST00000541488 BBS9Q3SYG4 887 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 DCAF15Q66K64 600 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 RNF111Q6ZNA4 994 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 CEP128Q6ZU80 1094 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 ZNF605Q86T29 641 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 PPFIBP1Q86W92 1011 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
PRKDC-210ENST00000541488 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
PRKDC-210ENST00000541488 TMEM82A0PJX8 343 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 CELA3BP08861 270 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 SDHBP21912 280 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 CCNFP41002 786 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 HDLBPQ00341 1268 aaKnown RBP6.65□□□□□ -1.34
PRKDC-210ENST00000541488 SLC14A2Q15849 920 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 METTL16Q86W50 562 aaKnown RBP6.65□□□□□ -1.34
PRKDC-210ENST00000541488 NT5DC4Q86YG4 428 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 SPPL2CQ8IUH8 684 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 LILRA2Q8N149 483 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 ANKS4BQ8N8V4 417 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 LINC01599Q8WXQ3 324 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 BRF1Q92994 677 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 CDADC1Q9BWV3 514 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 EFR3BQ9Y2G0 817 aa6.65□□□□□ -1.34
PRKDC-210ENST00000541488 CTSKP43235 329 aa6.64□□□□□ -1.35
PRKDC-210ENST00000541488 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
PRKDC-210ENST00000541488 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
PRKDC-210ENST00000541488 LSRQ86X29 649 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-210ENST00000541488 LINC00116Q8NCU8 138 aa6.64□□□□□ -1.35
PRKDC-210ENST00000541488 INTS4Q96HW7 963 aaKnown RBP6.64□□□□□ -1.35
PRKDC-210ENST00000541488 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
PRKDC-210ENST00000541488 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-210ENST00000541488 NOTOA8MTQ0 251 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 SHOXO15266 292 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 SUV39H1O43463 412 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 IMPDH2P12268 514 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 CHRNEQ04844 493 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 AXDND1Q5T1B0 1012 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-210ENST00000541488 ADGRF1Q5T601 910 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 DHRS1Q96LJ7 313 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 XYLT2Q9H1B5 865 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 SLC6A17Q9H1V8 727 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
PRKDC-210ENST00000541488 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-210ENST00000541488 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms