RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 MCUQ8NE86 351 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 DENND2AQ9ULE3 1009 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 POTEB3A0JP26 581 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 F8W8V4 182 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 POTEBQ6S5H4 581 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 METTL13Q8N6R0 699 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 MTX1Q13505 466 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TPTE2Q6XPS3 522 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 CCDC197Q8NCU1 140 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 KRT8P05787 483 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 ADCY7P51828 1080 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
HMGA2-210ENST00000541363 IL16Q14005 1332 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 NME9Q86XW9 330 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 PDE1BQ01064 536 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 ACBD5Q5T8D3 534 aaPredicted RBP16.78■□□□□ 0.28
HMGA2-210ENST00000541363 MAP7D3Q8IWC1 876 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.78■□□□□ 0.283e-7■■■■■ 66.7
HMGA2-210ENST00000541363 MCF2P10911 925 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 XRCC5P13010 732 aaKnown RBP16.78■□□□□ 0.28
HMGA2-210ENST00000541363 LIG3P49916 1009 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 NEK2P51955 445 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 BLVRAP53004 296 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 LRMPQ12912 555 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 TAF11Q15544 211 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
HMGA2-210ENST00000541363 DEPTORQ8TB45 409 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 USP6NLQ92738 828 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 ABCB4P21439 1286 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 ZSCAN32Q9NX65 697 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 HYOU1Q9Y4L1 999 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 IFRD2Q12894 506 aaPredicted RBP16.78■□□□□ 0.28
HMGA2-210ENST00000541363 MYSM1Q5VVJ2 828 aa16.78■□□□□ 0.28
HMGA2-210ENST00000541363 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 CCDC159P0C7I6 412 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 BCAS4Q8TDM0 211 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 LZICQ8WZA0 190 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 KRT33BQ14525 404 aa16.77■□□□□ 0.28
HMGA2-210ENST00000541363 NSD2O96028 1365 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 HLA-DPA1P20036 260 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 RYBPQ8N488 228 aaPredicted RBP16.77■□□□□ 0.27
HMGA2-210ENST00000541363 SGK1O00141 431 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 ST13P4Q8IZP2 240 aaPredicted RBP16.77■□□□□ 0.27
HMGA2-210ENST00000541363 SATB2Q9UPW6 733 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 H7C0C1 242 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 ALDH1L1O75891 902 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 ATP5OP48047 213 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 POLE2P56282 527 aa16.77■□□□□ 0.27
HMGA2-210ENST00000541363 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.27
HMGA2-210ENST00000541363 ZNF202O95125 648 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 YWHAGP61981 247 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGA2-210ENST00000541363 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
HMGA2-210ENST00000541363 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 YY1AP1Q9H869 796 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 C1orf112Q9NSG2 853 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 POC1B-GALNT4F8VUJ3 575 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 GDAP1L1Q96MZ0 367 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 HESX1Q9UBX0 185 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 USH1GQ495M9 461 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 SKIP12755 728 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
HMGA2-210ENST00000541363 PTPREP23469 700 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 NT5C3AQ9H0P0 336 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
HMGA2-210ENST00000541363 APBA1Q02410 837 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 NELFCDQ8IXH7 590 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 LMCD1Q9NZU5 365 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 HMGB3O15347 200 aaKnown RBP16.75■□□□□ 0.27
HMGA2-210ENST00000541363 KSR1Q8IVT5 923 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 COG4Q9H9E3 785 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 FAM207AQ9NSI2 230 aaPredicted RBP16.75■□□□□ 0.27
HMGA2-210ENST00000541363 INTS9Q9NV88 658 aaKnown RBP16.75■□□□□ 0.27
HMGA2-210ENST00000541363 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 CABP7Q86V35 215 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 ZBTB8OSQ8IWT0 167 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 TTC25Q96NG3 672 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 ZNF148Q9UQR1 794 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 IGHDP01880 384 aa16.75■□□□□ 0.27
HMGA2-210ENST00000541363 LIG4P49917 911 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms