RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 TMEM232C9JQI7 657 aa16.27■□□□□ 0.19
SFSWAP-210ENST00000541286 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.19
SFSWAP-210ENST00000541286 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.19
SFSWAP-210ENST00000541286 FANCLQ9NW38 375 aa16.27■□□□□ 0.19
SFSWAP-210ENST00000541286 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.19
SFSWAP-210ENST00000541286 SBF1O95248 1867 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 CMA1P23946 247 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 MCM6Q14566 821 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 LONRF3Q496Y0 759 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 APOA5Q6Q788 366 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 FANCGO15287 622 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 EVCP57679 992 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 PPARAQ07869 468 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 SLC39A14Q15043 492 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-210ENST00000541286 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 JMYQ8N9B5 988 aa16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 DRC1Q96MC2 740 aa16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 MYOZ2Q9NPC6 264 aa16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 PCDHA5Q9Y5H7 936 aa16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 POLR2AP24928 1970 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-210ENST00000541286 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 GTF2A1P52655 376 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 E2F4Q16254 413 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 CCDC150Q8NCX0 1101 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 GRIN1Q05586 938 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 ARGLU1Q9NWB6 273 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 GAKO14976 1311 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 CDKL5O76039 1030 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 BAG3O95817 575 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 NCAPHQ15003 741 aa16.24■□□□□ 0.19
SFSWAP-210ENST00000541286 MYL5Q02045 173 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 PDS5AQ29RF7 1337 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 SAFBQ15424 915 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■■■□ 21.8
SFSWAP-210ENST00000541286 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 ZMYM6O95789 1325 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 COBLO75128 1261 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 JAG1P78504 1218 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 NR5A1Q13285 461 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 VPS18Q9P253 973 aa16.23■□□□□ 0.19
SFSWAP-210ENST00000541286 SH2B2O14492 632 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 STX17P56962 302 aa16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 GSTO1P78417 241 aa16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 ADAM21Q9UKJ8 722 aa16.22■□□□□ 0.19
SFSWAP-210ENST00000541286 N4BP1O75113 896 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 GDF11O95390 407 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 LDHCP07864 332 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 AFMP43652 599 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 PDE4BQ07343 736 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 ANGEL2Q5VTE6 544 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 RABEP2Q9H5N1 569 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 DESI2Q9BSY9 194 aa16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 IRX2Q9BZI1 471 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-210ENST00000541286 RAD21O60216 631 aa16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 ZRANB2O95218 330 aaKnown RBP eCLIP16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 CASP1P29466 404 aa16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 KARSQ15046 597 aaKnown RBP16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 METTL16Q86W50 562 aaKnown RBP16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 STAMQ92783 540 aa16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 RRP15Q9Y3B9 282 aaKnown RBP16.21■□□□□ 0.18
SFSWAP-210ENST00000541286 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 H3BQF6 201 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 RGS22Q8NE09 1264 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms