RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PPP2R5BQ15173 497 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 RUFY3Q7L099 469 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 CTU1Q7Z7A3 348 aaKnown RBP21.92■■□□□ 1.1
VPS33A-205ENST00000541169 KIFC2Q96AC6 838 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 COA7Q96BR5 231 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 ATG4CQ96DT6 458 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 PAGR1Q9BTK6 254 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 SLC12A7Q9Y666 1083 aa21.92■■□□□ 1.1
VPS33A-205ENST00000541169 RPS6KB1P23443 525 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 GNAQP50148 359 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 TROAPQ12815 778 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 KCTD1Q719H9 257 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 MROH8Q9H579 483 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 EFCC1Q9HA90 598 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 SLC38A10Q9HBR0 1119 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 TXNRD2Q9NNW7 524 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 FBXO28Q9NVF7 368 aa21.91■■□□□ 1.1
VPS33A-205ENST00000541169 STRNO43815 780 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 PSMC4P43686 418 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 ZNF654Q8IZM8 581 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 CTCFLQ8NI51 663 aaPredicted RBP21.9■■□□□ 1.1
VPS33A-205ENST00000541169 LZTS2Q9BRK4 669 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 TEX13BQ9BXU2 312 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 SPATC1LQ9H0A9 340 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 MTMR7Q9Y216 660 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 CASP8AP2Q9UKL3 1982 aa21.9■■□□□ 1.1
VPS33A-205ENST00000541169 FMNL1O95466 1100 aaPredicted RBP21.89■■□□□ 1.09
VPS33A-205ENST00000541169 SMARCA1P28370 1054 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 STAT3P40763 770 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 TRAF1Q13077 416 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 GRM4Q14833 912 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 SYDE2Q5VT97 1194 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 CD99L2Q8TCZ2 262 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 BTBD7Q9P203 1132 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 PRR12Q9ULL5 1215 aa21.89■■□□□ 1.09
VPS33A-205ENST00000541169 MGAMO43451 1857 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 PALM3A6NDB9 673 aaPredicted RBP21.88■■□□□ 1.09
VPS33A-205ENST00000541169 TNPO2O14787 897 aaKnown RBP21.88■■□□□ 1.09
VPS33A-205ENST00000541169 CNMDO75829 334 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 TMEM132BQ14DG7 1078 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 TKFCQ3LXA3 575 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 SAMD1Q6SPF0 538 aaPredicted RBP21.88■■□□□ 1.09
VPS33A-205ENST00000541169 RIOX2Q8IUF8 465 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 AGXT2Q9BYV1 514 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 CWC22Q9HCG8 908 aaKnown RBP21.88■■□□□ 1.09
VPS33A-205ENST00000541169 GPCPD1Q9NPB8 672 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 FBXO40Q9UH90 709 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 ZNF214Q9UL59 606 aaPredicted RBP21.88■■□□□ 1.09
VPS33A-205ENST00000541169 IVNS1ABPQ9Y6Y0 642 aa21.88■■□□□ 1.09
VPS33A-205ENST00000541169 FRMPD2Q68DX3 1309 aaPredicted RBP21.87■■□□□ 1.09
VPS33A-205ENST00000541169 KLRF2D3W0D1 207 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 SEC24BO95487 1268 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 PLS1Q14651 629 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 ANKRD1Q15327 319 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 Q3C1V9 767 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 POTEEQ6S8J3 1075 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 ABRAQ8N0Z2 381 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 REPS2Q8NFH8 660 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 SOCS4Q8WXH5 440 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 MAF1Q9H063 256 aa21.87■■□□□ 1.09
VPS33A-205ENST00000541169 ALDH8A1Q9H2A2 487 aaPredicted RBP21.87■■□□□ 1.09
VPS33A-205ENST00000541169 RANBP17Q9H2T7 1088 aaKnown RBP21.87■■□□□ 1.09
VPS33A-205ENST00000541169 CCDC196A0A1B0GTZ2 297 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 RBM25P49756 843 aaKnown RBP21.86■■□□□ 1.09
VPS33A-205ENST00000541169 OTOP1Q7RTM1 612 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 PLEKHH3Q7Z736 793 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 TRIM47Q96LD4 638 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 MOV10L1Q9BXT6 1211 aaKnown RBP21.86■■□□□ 1.09
VPS33A-205ENST00000541169 RBM28Q9NW13 759 aaKnown RBP21.86■■□□□ 1.09
VPS33A-205ENST00000541169 MAD2L2Q9UI95 211 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 TRIM17Q9Y577 477 aa21.86■■□□□ 1.09
VPS33A-205ENST00000541169 COL11A1P12107 1806 aaPredicted RBP21.85■■□□□ 1.09
VPS33A-205ENST00000541169 EVCP57679 992 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 TTBK2Q6IQ55 1244 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 Q6ZUG5 572 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 FANCBQ8NB91 859 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 CHST13Q8NET6 341 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 NUP133Q8WUM0 1156 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 C22orf23Q9BZE7 217 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 SLC5A4Q9NY91 659 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 SRRDQ9UH36 339 aa21.85■■□□□ 1.09
VPS33A-205ENST00000541169 SLC15A5A6NIM6 579 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 ZBTB43O43298 467 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 ICAM1P05362 532 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 GOLGA8HP0CJ92 632 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 IRF5Q13568 498 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 SNRNP48Q6IEG0 339 aaKnown RBP21.84■■□□□ 1.09
VPS33A-205ENST00000541169 FBXO46Q6PJ61 603 aaPredicted RBP21.84■■□□□ 1.09
VPS33A-205ENST00000541169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.84■■□□□ 1.09
VPS33A-205ENST00000541169 GPR142Q7Z601 462 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 NUDT12Q9BQG2 462 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 LRRC2Q9BYS8 371 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 SENP2Q9HC62 589 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 PDRG1Q9NUG6 133 aa21.84■■□□□ 1.09
VPS33A-205ENST00000541169 ERCC3P19447 782 aa21.83■■□□□ 1.09
VPS33A-205ENST00000541169 SLC16A2P36021 539 aa21.83■■□□□ 1.09
VPS33A-205ENST00000541169 NCAPG2Q86XI2 1143 aa21.83■■□□□ 1.09
VPS33A-205ENST00000541169 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
VPS33A-205ENST00000541169 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms