RNA–Protein interactions for RNA: ENST00000540946.5

TOM1L2-209, Transcript of target of myb1 like 2 membrane trafficking protein, human

TSL 2 BASIC

Gene TOM1L2, Length 1,420 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L2-209	ENST00000540946	NEK4	P51957	841 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	RABEP1	Q15276	862 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	KIFC2	Q96AC6	838 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	ATG4C	Q96DT6	458 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	KIF2C	Q99661	725 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	GPCPD1	Q9NPB8	672 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CPA4	Q9UI42	421 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	MAD2L2	Q9UI95	211 aa		18.85	■□□□□ 0.61
TOM1L2-209	ENST00000540946	GPR25	O00155	361 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	VWA5A	O00534	786 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	ZBED4	O75132	1171 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CTCF	P49711	727 aa	Predicted RBP	18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	TOB2	Q14106	344 aa	Predicted RBP	18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	SYDE2	Q5VT97	1194 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	MICU3	Q86XE3	530 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	ANKRD13C	Q8N6S4	541 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CHMP4C	Q96CF2	233 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	R3HDML	Q9H3Y0	253 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	RBM28	Q9NW13	759 aa	Known RBP	18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	RBPJL	Q9UBG7	517 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	BRPF3	Q9ULD4	1205 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	PRR12	Q9ULL5	1215 aa		18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.84	■□□□□ 0.61
TOM1L2-209	ENST00000540946	KLRF2	D3W0D1	207 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	FOXN1	O15353	648 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	GOLGA8H	P0CJ92	632 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	OAZ1	P54368	228 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CCNA1	P78396	465 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	SP3	Q02447	781 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	APOBR	Q0VD83	1088 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	TTBK2	Q6IQ55	1244 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	FANCB	Q8NB91	859 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	GPRC5A	Q8NFJ5	357 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	LZTS2	Q9BRK4	669 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	PAGR1	Q9BTK6	254 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	MYL10	Q9BUA6	226 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	SLC38A10	Q9HBR0	1119 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	PNMA2	Q9UL42	364 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	NID2	Q14112	1375 aa		18.83	■□□□□ 0.61
TOM1L2-209	ENST00000540946	CCDC196	A0A1B0GTZ2	297 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ATP2A1	O14983	1001 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	FKTN	O75072	461 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	HSPA8	P11142	646 aa	Known RBP	18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SMARCA1	P28370	1054 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ERVK-9	P63128	1117 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ERVK-24	P63145	666 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	STAG2	Q8N3U4	1231 aa		18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ZNF274	Q96GC6	653 aa	Predicted RBP	18.83	■□□□□ 0.6
TOM1L2-209	ENST00000540946	GOLGA8A	A7E2F4	631 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	GOLGA8B	A8MQT2	603 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SLC16A2	P36021	539 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	AK2	P54819	239 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RTN1	Q16799	776 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	REPS2	Q8NFH8	660 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RANBP17	Q9H2T7	1088 aa	Known RBP	18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TXNRD2	Q9NNW7	524 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	BTBD7	Q9P203	1132 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TSKS	Q9UJT2	592 aa		18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.82	■□□□□ 0.6
TOM1L2-209	ENST00000540946	COL11A1	P12107	1806 aa	Predicted RBP	18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	CNMD	O75829	334 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	COPB2	P35606	906 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	METAP2	P50579	478 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	KIF22	Q14807	665 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ARHGEF6	Q15052	776 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	POTEE	Q6S8J3	1075 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ERO1A	Q96HE7	468 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SPATC1L	Q9H0A9	340 aa		18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ZNF214	Q9UL59	606 aa	Predicted RBP	18.81	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ST18	O60284	1047 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RXRA	P19793	462 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	PDIA3	P30101	505 aa	Known RBP	18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	LACTB	P83111	547 aa	Predicted RBP	18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TMEM132B	Q14DG7	1078 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ADGRF4	Q8IZF3	695 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SHCBP1	Q8NEM2	672 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SPZ1	Q9BXG8	430 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TEX13B	Q9BXU2	312 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	UBA5	Q9GZZ9	404 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RIOX1	Q9H6W3	641 aa		18.8	■□□□□ 0.6
TOM1L2-209	ENST00000540946	DHX16	O60231	1041 aa	Known RBP	18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	SLC25A27	O95847	323 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	MAPK4	P31152	587 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	STAT3	P40763	770 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TMTC3	Q6ZXV5	915 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RIOX2	Q8IUF8	465 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	CCAR1	Q8IX12	1150 aa	Known RBP	18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	CCDC144CP	Q8IYA2	1237 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	HPS5	Q9UPZ3	1129 aa		18.79	■□□□□ 0.6
TOM1L2-209	ENST00000540946	TRAF1	Q13077	416 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	PLS1	Q14651	629 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946		Q3C1V9	767 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	RAB11FIP4	Q86YS3	637 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	MTMR8	Q96EF0	704 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	MROH8	Q9H579	483 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	JMJD4	Q9H9V9	463 aa		18.78	■□□□□ 0.6
TOM1L2-209	ENST00000540946	GNRH1	P01148	92 aa		18.77	■□□□□ 0.6
TOM1L2-209	ENST00000540946	ICAM1	P05362	532 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms