RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 ZNF396Q96N95 335 aaPredicted RBP16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 ELP1O95163 1332 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 FIBPO43427 364 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 DCAF15Q66K64 600 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 FOXP1Q9H334 677 aaPredicted RBP16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 RIOX1Q9H6W3 641 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 ARHGEF10LQ9HCE6 1279 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 SH3GLB2Q9NR46 395 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 SAGE1Q9NXZ1 904 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 VPS54Q9P1Q0 977 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 ASNSP08243 561 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 MCOLN1Q9GZU1 580 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
CYB561A3-216ENST00000540755 FRMPD2Q68DX3 1309 aaPredicted RBP16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 NBPF12Q5TAG4 269 aaPredicted RBP16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 RNF186Q9NXI6 227 aa16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
CYB561A3-216ENST00000540755 SSC5DA1L4H1 1573 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 F5H6K3 240 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 MBD3O95983 291 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 SLC1A4P43007 532 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 KLRC3Q07444 240 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 CCDC96Q2M329 555 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 LEO1Q8WVC0 666 aaPredicted RBP16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 SPATA32Q96LK8 384 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 ZNF341Q9BYN7 854 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
CYB561A3-216ENST00000540755 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 NDUFB10O96000 172 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 KRT2P35908 639 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 UBE2HP62256 183 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 NOSTRINQ8IVI9 506 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 UBA5Q9GZZ9 404 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 GPCPD1Q9NPB8 672 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 ZNF112Q9UJU3 913 aa16.39■□□□□ 0.21
CYB561A3-216ENST00000540755 TRPA1O75762 1119 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 CALML3P27482 149 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 NPY5RQ15761 445 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 WWC2Q6AWC2 1192 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 KCTD1Q719H9 257 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 GOPCQ9HD26 462 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
CYB561A3-216ENST00000540755 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 NLRP5P59047 1200 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 DGKZQ13574 1117 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 SUPT20HL1Q3ZLR7 823 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 ADGRF4Q8IZF3 695 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 GPKOWQ92917 476 aaPredicted RBP eCLIP16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 PIGSQ96S52 555 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
CYB561A3-216ENST00000540755 STXBP3O00186 592 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 YEATS4O95619 227 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 BMP3P12645 472 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 GSE1Q14687 1217 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 VCPKMTQ9H867 229 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 VAT1LQ9HCJ6 419 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 PHIPQ8WWQ0 1821 aa16.36■□□□□ 0.21
CYB561A3-216ENST00000540755 RAD21O60216 631 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 NR5A1Q13285 461 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms