RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PTPAQ15257 358 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 MAP3K11Q16584 847 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 RILPL1Q5EBL4 403 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 TTBK2Q6IQ55 1244 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 PIK3AP1Q6ZUJ8 805 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 CKAP2LQ8IYA6 745 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 BLIDQ8IZY5 108 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 RNF214Q8ND24 703 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 RASGRP4Q8TDF6 673 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
PAAF1-209ENST00000540659 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 PANK2Q9BZ23 570 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 CLSTN2Q9H4D0 955 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 SH3GLB2Q9NR46 395 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
PAAF1-209ENST00000540659 CNOT7Q9UIV1 285 aaKnown RBP10.95□□□□□ -0.66
PAAF1-209ENST00000540659 PCDHA4Q9UN74 947 aa10.95□□□□□ -0.66
PAAF1-209ENST00000540659 BAZ2BQ9UIF8 2168 aaKnown RBP10.94□□□□□ -0.66
PAAF1-209ENST00000540659 ASTN2O75129 1339 aaPredicted RBP10.94□□□□□ -0.66
PAAF1-209ENST00000540659 H7C1D1 291 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 SNHG28P0DPA3 235 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 CALML3P27482 149 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 FSTL1Q12841 308 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 NPY5RQ15761 445 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 KIF4BQ2VIQ3 1234 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 METTL16Q86W50 562 aaKnown RBP10.94□□□□□ -0.66
PAAF1-209ENST00000540659 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 ADGRF4Q8IZF3 695 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 TRPM4Q8TD43 1214 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 TNFRSF25Q93038 417 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 COA7Q96BR5 231 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.94□□□□□ -0.66
PAAF1-209ENST00000540659 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
PAAF1-209ENST00000540659 A0A1W2PQ27 194 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 A0A1W2PQ64 194 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 A0A1W2PQD8 194 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 SMCO2A6NFE2 343 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 WNT7AO00755 349 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 KINO60870 393 aaKnown RBP10.93□□□□□ -0.66
PAAF1-209ENST00000540659 CUTAO60888 179 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 PFKFB1P16118 471 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 SLC1A4P43007 532 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 NDUFA8P51970 172 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 ZNF280AP59817 542 aaPredicted RBP10.93□□□□□ -0.66
PAAF1-209ENST00000540659 FAM160A1Q05DH4 1040 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 RASA3Q14644 834 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 ZNF174Q15697 407 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 SPECC1Q5M775 1068 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 TTC38Q5R3I4 469 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 FAM83AQ86UY5 434 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 DCAF4Q8WV16 495 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 NUP88Q99567 741 aaPredicted RBP10.93□□□□□ -0.66
PAAF1-209ENST00000540659 RIOX1Q9H6W3 641 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 ADARB2Q9NS39 739 aaKnown RBP10.93□□□□□ -0.66
PAAF1-209ENST00000540659 PCDHA6Q9UN73 950 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 PCDHA8Q9Y5H6 950 aa10.93□□□□□ -0.66
PAAF1-209ENST00000540659 TRPM7Q96QT4 1865 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 CCDC194A0A1B0GVG4 234 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 F5H6K3 240 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 ECE1P42892 770 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 GRIN1Q05586 938 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 KLRC3Q07444 240 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 SNW1Q13573 536 aaKnown RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 SHC4Q6S5L8 630 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 SIAH1Q8IUQ4 282 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 FMR1NBQ8N0W7 255 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 KRI1Q8N9T8 703 aaKnown RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 ENGASEQ8NFI3 743 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 CCDC12Q8WUD4 166 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 MKL1Q969V6 931 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 JMJD4Q9H9V9 463 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
PAAF1-209ENST00000540659 FBXO2Q9UK22 296 aaPredicted RBP10.92□□□□□ -0.66
PAAF1-209ENST00000540659 POLR2AP24928 1970 aaKnown RBP10.91□□□□□ -0.66
PAAF1-209ENST00000540659 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
PAAF1-209ENST00000540659 HSPA6P17066 643 aa10.91□□□□□ -0.66
PAAF1-209ENST00000540659 CMA1P23946 247 aa10.91□□□□□ -0.66
PAAF1-209ENST00000540659 MCM7P33993 719 aa10.91□□□□□ -0.66
PAAF1-209ENST00000540659 SNAP25P60880 206 aa10.91□□□□□ -0.66
PAAF1-209ENST00000540659 SASS6Q6UVJ0 657 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms