RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 ZNF384Q8TF68 577 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
NPC1-202ENST00000540608 NDUFA10O95299 355 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
NPC1-202ENST00000540608 VSNL1P62760 191 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 ZSCAN26Q16670 478 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 IRF2BP1Q8IU81 584 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 CHP1Q99653 195 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.19
NPC1-202ENST00000540608 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 ADSSL1Q8N142 457 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 MB21D1Q8N884 522 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 GOLGA5Q8TBA6 731 aa13.83□□□□□ -0.19
NPC1-202ENST00000540608 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.19
NPC1-202ENST00000540608 A0A1B0GUL6 1792 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 ZBTB22O15209 634 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 CALML3P27482 149 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 WDR93Q6P2C0 686 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 MAPK8IP1Q9UQF2 711 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 THRAP3Q9Y2W1 955 aaKnown RBP13.83□□□□□ -0.2
NPC1-202ENST00000540608 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 PSMD14O00487 310 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 NMT2O60551 498 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
NPC1-202ENST00000540608 STAT6P42226 847 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 LMAN1P49257 510 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 KCNQ4P56696 695 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 EVX2Q03828 476 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 CASP8Q14790 479 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 DNAJC7Q99615 494 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 HAUS4Q9H6D7 363 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 TMEM51Q9NW97 253 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 VPS18Q9P253 973 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 MINPP1Q9UNW1 487 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
NPC1-202ENST00000540608 LGALS16A8MUM7 142 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 BLIDQ8IZY5 108 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 FAM84BQ96KN1 310 aaPredicted RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 BSDC1Q9NW68 430 aaPredicted RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 CAPN11Q9UMQ6 739 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 LUC7L2Q9Y383 392 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 CAPN2P17655 700 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 KLRK1P26718 216 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 KCNB1Q14721 858 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 SF3B3Q15393 1217 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 FAM47AQ5JRC9 791 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 BICDL1Q6ZP65 573 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 THAP9Q9H5L6 903 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 DISC1Q9NRI5 854 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 CWC15Q9P013 229 aaKnown RBP13.82□□□□□ -0.2
NPC1-202ENST00000540608 GUCA1BQ9UMX6 200 aa13.82□□□□□ -0.2
NPC1-202ENST00000540608 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 KIF5BP33176 963 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 ACTN2P35609 894 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 NCAPH2Q6IBW4 605 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 ZNF662Q6ZS27 426 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
NPC1-202ENST00000540608 TSPYL1Q9H0U9 437 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 DCP1AQ9NPI6 582 aaPredicted RBP13.81□□□□□ -0.2
NPC1-202ENST00000540608 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
NPC1-202ENST00000540608 MYL1P05976 194 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
NPC1-202ENST00000540608 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 LINC00116Q8NCU8 138 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 TRIM10Q9UDY6 481 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 PCDHA4Q9UN74 947 aa13.81□□□□□ -0.2
NPC1-202ENST00000540608 TRIM49BA6NDI0 452 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 DTHD1Q6ZMT9 781 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 CRNKL1Q9BZJ0 848 aaKnown RBP13.8□□□□□ -0.2
NPC1-202ENST00000540608 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 CASZ1Q86V15 1759 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 SCN7AQ01118 1682 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
NPC1-202ENST00000540608 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
NPC1-202ENST00000540608 PMS1P54277 932 aaKnown RBP13.8□□□□□ -0.2
NPC1-202ENST00000540608 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 TMED8Q6PL24 325 aaPredicted RBP13.8□□□□□ -0.2
NPC1-202ENST00000540608 FBXO33Q7Z6M2 555 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms