RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 PTPRFP10586 1907 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 ELP1O95163 1332 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 M0R2N6 131 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 STXBP3O00186 592 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 LIG1P18858 919 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 RASGRP4Q8TDF6 673 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 TRIM34Q9BYJ4 488 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 RLFQ13129 1914 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 CAP2P40123 477 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 JMJD4Q9H9V9 463 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 RAD21O60216 631 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 SNAP25P60880 206 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 LINC00301Q8NCQ3 95 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 F5H6K3 240 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 NDUFB10O96000 172 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 KLRC3Q07444 240 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 PTPAQ15257 358 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
C1R-206ENST00000540394 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 INPP5BP32019 993 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 UBE2HP62256 183 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 WASF1Q92558 559 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
C1R-206ENST00000540394 BRCA2P51587 3418 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 H7C1D1 291 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 GRIN1Q05586 938 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
C1R-206ENST00000540394 ZSCAN23Q3MJ62 389 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 FOXP1Q9H334 677 aaPredicted RBP13.15□□□□□ -0.3
C1R-206ENST00000540394 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
C1R-206ENST00000540394 POTECB2RU33 542 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 NASPP49321 788 aaPredicted RBP13.14□□□□□ -0.31
C1R-206ENST00000540394 TRIM29Q14134 588 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
C1R-206ENST00000540394 COA7Q96BR5 231 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 SCAND2PQ9GZW5 306 aaPredicted RBP13.14□□□□□ -0.31
C1R-206ENST00000540394 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
C1R-206ENST00000540394 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
C1R-206ENST00000540394 SCN4AP35499 1836 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 ASPRV1Q53RT3 343 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
C1R-206ENST00000540394 NR1I2O75469 434 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
C1R-206ENST00000540394 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
C1R-206ENST00000540394 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 ADM5C9JUS6 153 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
C1R-206ENST00000540394 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 KRT2P35908 639 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 SLC1A4P43007 532 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 MMP14P50281 582 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 GPR162Q16538 588 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
C1R-206ENST00000540394 EDIL3O43854 480 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 TNNI2P48788 182 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 GNAQP50148 359 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 TNFAIP1Q13829 316 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
C1R-206ENST00000540394 CLIC6Q96NY7 704 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 SYCE3A1L190 88 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 ATP2B1P20020 1258 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 NLRP5P59047 1200 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 PIK3AP1Q6ZUJ8 805 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
C1R-206ENST00000540394 PRKG1Q13976 671 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
C1R-206ENST00000540394 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
C1R-206ENST00000540394 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
C1R-206ENST00000540394 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
C1R-206ENST00000540394 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
C1R-206ENST00000540394 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms