RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 BMP2KLQ5H9B9 411 aa17.77■□□□□ 0.43
UBE3B-212ENST00000540230 COBLO75128 1261 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
UBE3B-212ENST00000540230 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
UBE3B-212ENST00000540230 GJA8P48165 433 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 STAT2P52630 851 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 MROH8Q9H579 483 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
UBE3B-212ENST00000540230 RAVER2Q9HCJ3 691 aaKnown RBP17.76■□□□□ 0.43
UBE3B-212ENST00000540230 PAK6Q9NQU5 681 aaPredicted RBP17.76■□□□□ 0.43
UBE3B-212ENST00000540230 SLC25A27O95847 323 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 HOXC6P09630 235 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 PRKAR2AP13861 404 aaKnown RBP17.75■□□□□ 0.43
UBE3B-212ENST00000540230 CACNB2Q08289 660 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-212ENST00000540230 SNRNP48Q6IEG0 339 aaKnown RBP17.75■□□□□ 0.43
UBE3B-212ENST00000540230 TTBK2Q6IQ55 1244 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
UBE3B-212ENST00000540230 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 ESYT1Q9BSJ8 1104 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.75■□□□□ 0.43
UBE3B-212ENST00000540230 ZSWIM5Q9P217 1185 aa17.75■□□□□ 0.43
UBE3B-212ENST00000540230 SNAP25P60880 206 aa17.74■□□□□ 0.43
UBE3B-212ENST00000540230 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-212ENST00000540230 CCDC96Q2M329 555 aa17.74■□□□□ 0.43
UBE3B-212ENST00000540230 MAP4K1Q92918 833 aa17.74■□□□□ 0.43
UBE3B-212ENST00000540230 TEX13BQ9BXU2 312 aa17.74■□□□□ 0.43
UBE3B-212ENST00000540230 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-212ENST00000540230 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 STRNO43815 780 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 ZBED4O75132 1171 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 IGHA2P01877 340 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 PDHBP11177 359 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 STOX1Q6ZVD7 989 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 TTC14Q96N46 770 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
UBE3B-212ENST00000540230 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 RBM8AQ9Y5S9 174 aaKnown RBP17.73■□□□□ 0.43
UBE3B-212ENST00000540230 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-212ENST00000540230 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 ZNF536O15090 1300 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 RPTORQ8N122 1335 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 SMCHD1A6NHR9 2005 aa17.73■□□□□ 0.43
UBE3B-212ENST00000540230 PLA2G6O60733 806 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 SGPL1O95470 568 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 PGK2P07205 417 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 FCER1AP12319 257 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 TAL1P17542 331 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 CYP2C19P33261 490 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 SLC16A2P36021 539 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 ENAHQ8N8S7 591 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 CHURC1Q8WUH1 139 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 ZSCAN10Q96SZ4 725 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 MMP19Q99542 508 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 KRT23Q9C075 422 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 HMX1Q9NP08 348 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-212ENST00000540230 TNKSO95271 1327 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 SNHG28P0DPA3 235 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 IQCA1Q86XH1 822 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
UBE3B-212ENST00000540230 E7EWF7 191 aa17.71■□□□□ 0.43
UBE3B-212ENST00000540230 AGBL1Q96MI9 1066 aa17.71■□□□□ 0.43
UBE3B-212ENST00000540230 CRISPLD2Q9H0B8 497 aa17.71■□□□□ 0.43
UBE3B-212ENST00000540230 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-212ENST00000540230 FRMPD3Q5JV73 1810 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
UBE3B-212ENST00000540230 NT5C2P49902 561 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 ZNF543Q08ER8 600 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 COL9A3Q14050 684 aaPredicted RBP17.7■□□□□ 0.42
UBE3B-212ENST00000540230 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 BTNL9Q6UXG8 535 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 UBE2Q1Q7Z7E8 422 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 PNMA1Q8ND90 353 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 TRPV1Q8NER1 839 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 ANKS1AQ92625 1134 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 MAML3Q96JK9 1138 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 CPVLQ9H3G5 476 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
UBE3B-212ENST00000540230 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 COPB2P35606 906 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 OAZ1P54368 228 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 KCTD2Q14681 263 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 SEC23AQ15436 765 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 ZNF792Q3KQV3 632 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 MFSD14CQ5VZR4 134 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 OLFML2BQ68BL8 750 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 ANO2Q9NQ90 1003 aa17.69■□□□□ 0.42
UBE3B-212ENST00000540230 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms