RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 LAD1O00515 517 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 PLEKHA8P1O95397 391 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 BAG4O95429 457 aaKnown RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 YEATS4O95619 227 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 GUCY1A2P33402 732 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 PPIL2Q13356 520 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 AP3B2Q13367 1082 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 FBXO11Q86XK2 927 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 SLC10A4Q96EP9 437 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 PHF20Q9BVI0 1012 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 MORC2Q9Y6X9 1032 aaPredicted RBP13.52□□□□□ -0.25
VTN-202ENST00000539746 ABCB11O95342 1321 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
VTN-202ENST00000539746 MCM4P33991 863 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
VTN-202ENST00000539746 EVX2Q03828 476 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 REXO1Q8N1G1 1221 aaKnown RBP13.51□□□□□ -0.25
VTN-202ENST00000539746 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 MPHOSPH6Q99547 160 aaKnown RBP13.51□□□□□ -0.25
VTN-202ENST00000539746 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 POLR3EQ9NVU0 708 aa13.51□□□□□ -0.25
VTN-202ENST00000539746 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
VTN-202ENST00000539746 B4DLN1 442 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
VTN-202ENST00000539746 OSBPP22059 807 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 SPP2Q13103 211 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 MTMR2Q13614 643 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 VGLL4Q14135 290 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
VTN-202ENST00000539746 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 TMEM87AQ8NBN3 555 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 SMC1BQ8NDV3 1235 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 MTMR8Q96EF0 704 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 GBA2Q9HCG7 927 aaPredicted RBP13.5□□□□□ -0.25
VTN-202ENST00000539746 FBXO40Q9UH90 709 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 SLC45A1Q9Y2W3 748 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
VTN-202ENST00000539746 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
VTN-202ENST00000539746 FLOT1O75955 427 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 GOLGA8HP0CJ92 632 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 CETPP11597 493 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
VTN-202ENST00000539746 INPP5BP32019 993 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 GTF2A2P52657 109 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 UBE2HP62256 183 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 RESTQ13127 1097 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
VTN-202ENST00000539746 COG2Q14746 738 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 STK38Q15208 465 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
VTN-202ENST00000539746 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
VTN-202ENST00000539746 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 RAB34Q9BZG1 259 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 PSTPIP2Q9H939 334 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 RTEL1Q9NZ71 1219 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 AFG3L2Q9Y4W6 797 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
VTN-202ENST00000539746 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 TRIM75PA6NK02 468 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 SPDYE3A6NKU9 549 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 STXBP3O00186 592 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 VCAM1P19320 739 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 INHBEP58166 350 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 IRX3P78415 501 aaPredicted RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 PKN1Q16512 942 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms