RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 STAT2P52630 851 aa18.64■□□□□ 0.57
TRAF3-204ENST00000539721 SAFBQ15424 915 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAF3-204ENST00000539721 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
TRAF3-204ENST00000539721 BTNL9Q6UXG8 535 aa18.64■□□□□ 0.57
TRAF3-204ENST00000539721 HEATR3Q7Z4Q2 680 aa18.64■□□□□ 0.57
TRAF3-204ENST00000539721 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
TRAF3-204ENST00000539721 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
TRAF3-204ENST00000539721 DGKZQ13574 1117 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 GNL2Q13823 731 aaKnown RBP18.63■□□□□ 0.57
TRAF3-204ENST00000539721 WWC2Q6AWC2 1192 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 CLMNQ96JQ2 1002 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 EMILIN3Q9NT22 766 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 PNMA6FA0A0J9YX94 578 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 C19orf81C9J6K1 198 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 KIF23Q02241 960 aaPredicted RBP18.63■□□□□ 0.57
TRAF3-204ENST00000539721 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 CHURC1Q8WUH1 139 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 SHISA4Q96DD7 197 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 MTMR8Q96EF0 704 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 PHF20Q9BVI0 1012 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 SH3GLB2Q9NR46 395 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
TRAF3-204ENST00000539721 PTPRFP10586 1907 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 ZBTB5O15062 677 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 HMGCS2P54868 508 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 FAM160B2Q86V87 743 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 ERO1BQ86YB8 467 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 BARHL2Q9NY43 387 aa18.62■□□□□ 0.57
TRAF3-204ENST00000539721 TCHHQ07283 1943 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 hCG_1984214I3L0E3 225 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 STXBP3O00186 592 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 PLA2G6O60733 806 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 VCAM1P19320 739 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 NLRP5P59047 1200 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 PPATQ06203 517 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
TRAF3-204ENST00000539721 DIS3L2Q8IYB7 885 aaKnown RBP18.61■□□□□ 0.57
TRAF3-204ENST00000539721 ZNF713Q8N859 430 aaPredicted RBP18.61■□□□□ 0.57
TRAF3-204ENST00000539721 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 GPBP1L1Q9HC44 474 aaPredicted RBP18.61■□□□□ 0.57
TRAF3-204ENST00000539721 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 TMOD4Q9NZQ9 345 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 PRR12Q9ULL5 1215 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 TRPM7Q96QT4 1865 aa18.61■□□□□ 0.57
TRAF3-204ENST00000539721 KIF28PB7ZC32 967 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 CELF2O95319 508 aaKnown RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 NAPAP54920 295 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 FKBP1BP68106 108 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 QRICH1Q2TAL8 776 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 LDLRAD1Q5T700 205 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 CCDC12Q8WUD4 166 aaPredicted RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 GBA2Q9HCG7 927 aaPredicted RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 KRT2P35908 639 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 NFKBIBQ15653 356 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 BRAPQ7Z569 592 aa18.6■□□□□ 0.57
TRAF3-204ENST00000539721 RPAP3Q9H6T3 665 aaPredicted RBP18.6■□□□□ 0.57
TRAF3-204ENST00000539721 UNCXA6NJT0 531 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 BTBD18B2RXH4 712 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 NCLP19338 710 aaKnown RBP18.59■□□□□ 0.57
TRAF3-204ENST00000539721 CALML3P27482 149 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 SNAP25P60880 206 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
TRAF3-204ENST00000539721 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
TRAF3-204ENST00000539721 C2orf69Q8N8R5 385 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 COA7Q96BR5 231 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 FOXP1Q9H334 677 aaPredicted RBP18.59■□□□□ 0.57
TRAF3-204ENST00000539721 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
TRAF3-204ENST00000539721 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
TRAF3-204ENST00000539721 PPP1R11O60927 126 aaPredicted RBP18.58■□□□□ 0.57
TRAF3-204ENST00000539721 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.57
TRAF3-204ENST00000539721 U2AF2P26368 475 aaKnown RBP eCLIP18.58■□□□□ 0.57
TRAF3-204ENST00000539721 MCM4P33991 863 aa18.58■□□□□ 0.57
TRAF3-204ENST00000539721 PPIL2Q13356 520 aa18.58■□□□□ 0.57
TRAF3-204ENST00000539721 OXER1Q8TDS5 423 aa18.58■□□□□ 0.57
TRAF3-204ENST00000539721 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.56
TRAF3-204ENST00000539721 PPP1R18Q6NYC8 613 aa18.58■□□□□ 0.56
TRAF3-204ENST00000539721 OPTNQ96CV9 577 aa18.58■□□□□ 0.56
TRAF3-204ENST00000539721 SLC10A4Q96EP9 437 aa18.58■□□□□ 0.56
TRAF3-204ENST00000539721 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.56
TRAF3-204ENST00000539721 GOLGA6L22H0YM25 854 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 IRF6O14896 467 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 FLOT1O75955 427 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 KRT85P78386 507 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 NR5A1Q13285 461 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 NPY5RQ15761 445 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms