RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 U3KQE9 123 aa9.77□□□□□ -0.85
TRAV11-201ENST00000539512 KCNH1O95259 989 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 PCBP3P57721 371 aaKnown RBP9.76□□□□□ -0.85
TRAV11-201ENST00000539512 POU4F1Q01851 419 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 GIMAP6Q6P9H5 292 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 TSPYL5Q86VY4 417 aaPredicted RBP9.76□□□□□ -0.85
TRAV11-201ENST00000539512 ZNF227Q86WZ6 799 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 STK11IPQ8N1F8 1099 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 THAP3Q8WTV1 239 aaPredicted RBP9.76□□□□□ -0.85
TRAV11-201ENST00000539512 HDAC8Q9BY41 377 aa9.76□□□□□ -0.85
TRAV11-201ENST00000539512 BSDC1Q9NW68 430 aaPredicted RBP9.76□□□□□ -0.85
TRAV11-201ENST00000539512 SHROOM4Q9ULL8 1493 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 TLDC2A0PJX2 215 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 SHISA3A0PJX4 238 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
TRAV11-201ENST00000539512 ITGAVP06756 1048 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 NOP2P46087 812 aaKnown RBP9.75□□□□□ -0.85
TRAV11-201ENST00000539512 AMPD2Q01433 879 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 PRKCQQ04759 706 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 GRB10Q13322 594 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 AOC3Q16853 763 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 CREG2Q8IUH2 290 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 ARHGEF39Q8N4T4 335 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 CDC6Q99741 560 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
TRAV11-201ENST00000539512 EMC9Q9Y3B6 208 aa9.75□□□□□ -0.85
TRAV11-201ENST00000539512 DIAPH1O60610 1272 aaKnown RBP9.74□□□□□ -0.85
TRAV11-201ENST00000539512 CLSTN1O94985 981 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 HOXA10P31260 410 aaPredicted RBP9.74□□□□□ -0.85
TRAV11-201ENST00000539512 IKZF1Q13422 519 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 CRTC3Q6UUV7 619 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 AARSD1Q9BTE6 412 aaKnown RBP9.74□□□□□ -0.85
TRAV11-201ENST00000539512 VAV3Q9UKW4 847 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 RNF112Q9ULX5 631 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 MRPL42Q9Y6G3 142 aaKnown RBP9.74□□□□□ -0.85
TRAV11-201ENST00000539512 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
TRAV11-201ENST00000539512 TRAV20A0A0B4J274 112 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 H0Y8X5 98 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 SRFP11831 508 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
TRAV11-201ENST00000539512 C2orf27AQ580R0 203 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 SH3TC2Q8TF17 1288 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 TCTN2Q96GX1 697 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 ATP13A1Q9HD20 1204 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
TRAV11-201ENST00000539512 MINPP1Q9UNW1 487 aa9.73□□□□□ -0.85
TRAV11-201ENST00000539512 A0A1W2PQU0 124 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 CD3EP07766 207 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 SYPP08247 313 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 KCNJ6P48051 423 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 PPP2R2AP63151 447 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 DPY19L1Q2PZI1 675 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
TRAV11-201ENST00000539512 RNF111Q6ZNA4 994 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 TRIM59Q8IWR1 403 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 SLC26A8Q96RN1 970 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 SLC5A6Q9Y289 635 aa9.72□□□□□ -0.85
TRAV11-201ENST00000539512 BMP8BP34820 402 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 GTF2IRD2BQ6EKJ0 949 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 SDE2Q6IQ49 451 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 GTF2IRD2Q86UP8 949 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 JAZF1Q86VZ6 243 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 LILRB2Q8N423 598 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 BTN2A2Q8WVV5 523 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 TCFL5Q9UL49 500 aa9.71□□□□□ -0.86
TRAV11-201ENST00000539512 GPR55Q9Y2T6 319 aaPredicted RBP9.71□□□□□ -0.86
TRAV11-201ENST00000539512 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 SNRPB2P08579 225 aaKnown RBP9.7□□□□□ -0.86
TRAV11-201ENST00000539512 SSTR4P31391 388 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 EGR3Q06889 387 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 MSMPQ1L6U9 139 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
TRAV11-201ENST00000539512 HOMER1Q86YM7 354 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 ZBTB38Q8NAP3 1195 aaPredicted RBP9.7□□□□□ -0.86
TRAV11-201ENST00000539512 CCDC140Q96MF4 163 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 LGR4Q9BXB1 951 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 SEMA3GQ9NS98 782 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
TRAV11-201ENST00000539512 FKTNO75072 461 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 VSIG10LQ86VR7 867 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 KSR1Q8IVT5 923 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 ZNF513Q8N8E2 541 aaPredicted RBP9.69□□□□□ -0.86
TRAV11-201ENST00000539512 NAT16Q8N8M0 369 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 APPBP2Q92624 585 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 MRGPRX3Q96LB0 322 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 RNPC3Q96LT9 517 aaKnown RBP9.69□□□□□ -0.86
TRAV11-201ENST00000539512 CDADC1Q9BWV3 514 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 FOXP3Q9BZS1 431 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 PCDHA11Q9Y5I1 949 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
TRAV11-201ENST00000539512 WASH4PA8MWX3 477 aa9.68□□□□□ -0.86
TRAV11-201ENST00000539512 STXBP3O00186 592 aa9.68□□□□□ -0.86
TRAV11-201ENST00000539512 VAMP4O75379 141 aa9.68□□□□□ -0.86
TRAV11-201ENST00000539512 CDC45O75419 566 aa9.68□□□□□ -0.86
TRAV11-201ENST00000539512 GSTM1P09488 218 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms