RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 LACRTQ9GZZ8 138 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 RBM28Q9NW13 759 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 STIM2Q9P246 746 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 MAGEC2Q9UBF1 373 aaPredicted RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 DDX20Q9UHI6 824 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 BAIAP2L1Q9UHR4 511 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 REXO2Q9Y3B8 237 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 SRPRBQ9Y5M8 271 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 NRKQ7Z2Y5 1582 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 UTYO14607 1347 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 AGLP35573 1532 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 IFIT3O14879 490 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 GPAA1O43292 621 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 SEMA3FQ13275 785 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 SLC39A6Q13433 755 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 PDAP1Q13442 181 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 CUL4BQ13620 913 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 TCP11X2Q5H9J9 407 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 RRP12Q5JTH9 1297 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 MSL1Q68DK7 614 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 CMTR1Q8N1G2 835 aaKnown RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 MYCBPAPQ8TBZ2 947 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 RNF217Q8TC41 542 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 TBC1D22AQ8WUA7 517 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 NUP133Q8WUM0 1156 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 NELFBQ8WX92 580 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 METTL22Q9BUU2 404 aaPredicted RBP5.07□□□□□ -1.6
PLS3-209ENST00000539310 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 CEP126Q9P2H0 1117 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 DENND2AQ9ULE3 1009 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 NFU1Q9UMS0 254 aa5.07□□□□□ -1.6
PLS3-209ENST00000539310 ABCC6O95255 1503 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 XRN1Q8IZH2 1706 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 ESYT3A0FGR9 886 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 TRIM75PA6NK02 468 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 PPP1R3GB7ZBB8 358 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 RNMTO43148 476 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 BUB1BO60566 1050 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 RASSF9O75901 435 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 FAM107AO95990 144 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 MMP1P03956 469 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 PDE6BP35913 854 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SSR1P43307 286 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 TOB1P50616 345 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 HERVK_113P62684 666 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 IRX1P78414 480 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 HLTFQ14527 1009 aaKnown RBP eCLIP5.06□□□□□ -1.6
PLS3-209ENST00000539310 PTGISQ16647 500 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 YTHDF3Q7Z739 585 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 ZNF467Q7Z7K2 595 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 IFT20Q8IY31 132 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 FUKQ8N0W3 1084 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 FNBP4Q8N3X1 1017 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 ARFGAP2Q8N6H7 521 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 TRIM58Q8NG06 486 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SYMPKQ92797 1274 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 LRRC59Q96AG4 307 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 SPDL1Q96EA4 605 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 FAXDC2Q96IV6 333 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ALS2CR12Q96Q35 445 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 UBAC1Q9BSL1 405 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 PUS7LQ9H0K6 701 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 ACTR5Q9H9F9 607 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 SENP2Q9HC62 589 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SMARCAL1Q9NZC9 954 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 UBN2Q6ZU65 1347 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ANO9A1A5B4 782 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 NUTM2BA6NNL0 878 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 NUTM2EB1AL46 878 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 HMGB1P1B2RPK0 211 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 IRF6O14896 467 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ZFYP08048 801 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 EPB41P11171 864 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 MDH1P40925 334 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 IL15P40933 162 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 RFX5P48382 616 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 MAP2K1Q02750 393 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 GUCY2DQ02846 1103 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SF3A3Q12874 501 aaKnown RBP eCLIP5.06□□□□□ -1.6
PLS3-209ENST00000539310 PLCB4Q15147 1175 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 PPP1R7Q15435 360 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 CPLX4Q7Z7G2 160 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 PNMA8AQ86V59 439 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 GPIHBP1Q8IV16 184 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ZNF579Q8NAF0 562 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 ARMC2Q8NEN0 867 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SMCR8Q8TEV9 937 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 RBM33Q96EV2 1170 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 THOC1Q96FV9 657 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 XAGE2Q96GT9 111 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ZNF594Q96JF6 807 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 NHEJ1Q9H9Q4 299 aaPredicted RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 EPB41L5Q9HCM4 733 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 SPATS2LQ9NUQ6 558 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 VPS54Q9P1Q0 977 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 LIMA1Q9UHB6 759 aaKnown RBP5.06□□□□□ -1.6
PLS3-209ENST00000539310 SNX12Q9UMY4 172 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 CEMIPQ8WUJ3 1361 aa5.06□□□□□ -1.6
PLS3-209ENST00000539310 ROBO2Q9HCK4 1378 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms