RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NOVP48745 357 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 STAT2P52630 851 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NLRP5P59047 1200 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GUCY1B3Q02153 619 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PPATQ06203 517 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 TRAF1Q13077 416 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 HEATR3Q7Z4Q2 680 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FAM160B2Q86V87 743 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 LPAR1Q92633 364 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SCG2P13521 617 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 HSPA6P17066 643 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 HMGCS2P54868 508 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 BACE1P56817 501 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SIAH1Q8IUQ4 282 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ADGRF4Q8IZF3 695 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CPVLQ9H3G5 476 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NID2Q14112 1375 aa12.3□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MYH6P13533 1939 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ZBED4O75132 1171 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FLOT1O75955 427 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NAPAP54920 295 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 HUNKP57058 714 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PABPC4Q13310 644 aaKnown RBP eCLIP12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NTRK3Q16288 839 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 OPTNQ96CV9 577 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CLMNQ96JQ2 1002 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PIGSQ96S52 555 aa12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CXCL11O14625 94 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ZSCAN22P10073 491 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 OSBPP22059 807 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CALML3P27482 149 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PPIL2Q13356 520 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 KRT40Q6A162 431 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 RASGRP2Q7LDG7 609 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NBPF11Q86T75 865 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 C6orf50Q9HD87 102 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 AFG3L2Q9Y4W6 797 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
TNFRSF1A-211ENST00000538363 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZBTB5O15062 677 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FDPSP14324 419 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 APLP1P51693 650 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FSTL1Q12841 308 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CDC37Q16543 378 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 OTUD7BQ6GQQ9 843 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FERMT3Q86UX7 667 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FBXO11Q86XK2 927 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZSCAN16Q9H4T2 348 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms