RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NDC80O14777 642 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 GPSM2P81274 684 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 DMP1Q13316 513 aaPredicted RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 ASPRV1Q53RT3 343 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 PPP1R21Q6ZMI0 780 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 TTLL11Q8NHH1 800 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 GTF3C6Q969F1 213 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 SERTAD1Q9UHV2 236 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ABCA9Q8IUA7 1624 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 SPATA31A6Q5VVP1 1343 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 TULP4Q9NRJ4 1543 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CYP19A1P11511 503 aaPredicted RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 SNX16P57768 344 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 DDX12PQ92771 950 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RPS6KC1Q96S38 1066 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RIOK1Q9BRS2 568 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 PUS7LQ9H0K6 701 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 DHX36Q9H2U1 1008 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 PIH1D3Q9NQM4 214 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 TAB2Q9NYJ8 693 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 TTLL3Q9Y4R7 772 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CD2APQ9Y5K6 639 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RNF123Q5XPI4 1314 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CTAGE15A4D2H0 777 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 AKR1B15C9JRZ8 316 aaPredicted RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 TNNC2P02585 160 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CTAGE8P0CG41 777 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 MIS18BP1Q6P0N0 1132 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 KRT26Q7Z3Y9 468 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CTAGE6Q86UF2 777 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CTAGE4Q8IX94 777 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RASGRP4Q8TDF6 673 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 KANSL2Q9H9L4 492 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 TXNDC16Q9P2K2 825 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 MYO1AQ9UBC5 1043 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ATP2A1O14983 1001 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 OR52Z1P0C646 297 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 LRCH2Q5VUJ6 765 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 IGSF22Q8N9C0 903 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 COA7Q96BR5 231 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 PIGSQ96S52 555 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 WRNIP1Q96S55 665 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ADD3Q9UEY8 706 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 PARP2Q9UGN5 583 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 MARK3P27448 753 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RNASE9P60153 205 aaKnown RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 BIRC2Q13490 618 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RASGRF1Q13972 1273 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 PPP2R5DQ14738 602 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ZMYM1Q5SVZ6 1142 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 USP17L2Q6R6M4 530 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CEP112Q8N8E3 955 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ZNF274Q96GC6 653 aaPredicted RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 TSGA10Q9BZW7 698 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ST7Q9NRC1 585 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.95□□□□□ -1.46
LRP6-203ENST00000538239 CROCC2H7BZ55 1655 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 VPS72Q15906 364 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 MCTP2Q6DN12 878 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 DCUN1D2Q6PH85 259 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 ZNF589Q86UQ0 364 aaPredicted RBP5.95□□□□□ -1.46
LRP6-203ENST00000538239 GPR108Q9NPR9 543 aa5.95□□□□□ -1.46
LRP6-203ENST00000538239 CCDC66A2RUB6 948 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 DLATP10515 647 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 VWA3BQ502W6 1294 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 CFAP58Q5T655 872 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 RNF187Q5TA31 235 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 FMNL3Q8IVF7 1028 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 PNMA2Q9UL42 364 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 ZBTB24O43167 697 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 CDK8P49336 464 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 PTPN12Q05209 780 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 NOSTRINQ8IVI9 506 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 NLRP7Q8WX94 980 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 IFT81Q8WYA0 676 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 CELF1Q92879 486 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 FAM204AQ9H8W3 233 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 PNMA3Q9UL41 463 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 TPCN1Q9ULQ1 816 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 MINPP1Q9UNW1 487 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 SOS2Q07890 1332 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 FAM196BA6NMK8 535 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 SNAP23O00161 211 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 UAP1Q16222 522 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 LONRF3Q496Y0 759 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 CCDC122Q5T0U0 273 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 GPATCH4Q5T3I0 446 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 ZHX2Q9Y6X8 837 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 GH2P01242 217 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 BCRP11274 1271 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 ATF7P17544 494 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 UBE2SQ16763 222 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 FAM107BQ9H098 131 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 SERPINA10Q9UK55 444 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 C1orf167Q5SNV9 1468 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 ADRA2BP18089 450 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 NLRP12P59046 1061 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 RNASELQ05823 741 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms