RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 TNNT1P13805 278 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 SCNN1DP51172 638 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 GABPAQ06546 454 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 DBNDD1Q9H9R9 158 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 ANO10Q9NW15 660 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
CLIP1-210ENST00000538120 MYH6P13533 1939 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
CLIP1-210ENST00000538120 CYTH3O43739 400 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 PICALMQ13492 652 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
CLIP1-210ENST00000538120 RASGRP2Q7LDG7 609 aa12.28□□□□□ -0.44
CLIP1-210ENST00000538120 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
CLIP1-210ENST00000538120 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
CLIP1-210ENST00000538120 LONRF3Q496Y0 759 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 PODNQ7Z5L7 613 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
CLIP1-210ENST00000538120 USP40Q9NVE5 1235 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 KCNH3Q9ULD8 1083 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 USP27XA6NNY8 438 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 CDC42EP5Q6NZY7 148 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 CEP95Q96GE4 821 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 FOCADQ5VW36 1801 aa12.27□□□□□ -0.45
CLIP1-210ENST00000538120 SLX4Q8IY92 1834 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 TRIM75PA6NK02 468 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 NLRP5P59047 1200 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 STK32BQ9NY57 414 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 MYH1P12882 1939 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 ADAMTSL1Q8N6G6 1762 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 GNAQP50148 359 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
CLIP1-210ENST00000538120 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
CLIP1-210ENST00000538120 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
CLIP1-210ENST00000538120 CEP131Q9UPN4 1083 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 PCDHAC2Q9Y5I4 1007 aa12.26□□□□□ -0.45
CLIP1-210ENST00000538120 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 GOLGA8HP0CJ92 632 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 CRKP46108 304 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 NLRP12P59046 1061 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 TPD52L1Q16890 204 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 SECISBP2LQ93073 1101 aaKnown RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 CSRNP2Q9H175 543 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 SH3GLB2Q9NR46 395 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 PLIN4Q96Q06 1357 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 M0R2N6 131 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 BIN1O00499 593 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 ECE2O60344 883 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 AKR1B1P15121 316 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 NFIAQ12857 509 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 ZNF174Q15697 407 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 STRIP1Q5VSL9 837 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 ZFPM1Q8IX07 1006 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 TEKT1Q969V4 418 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
CLIP1-210ENST00000538120 OSBPL5Q9H0X9 879 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-210ENST00000538120 FOXN1O15353 648 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 PNOCQ13519 176 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 WWC2Q6AWC2 1192 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-210ENST00000538120 ELOA2Q8IYF1 753 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-210ENST00000538120 CEP57L1Q8IYX8 460 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 ZDHHC15Q96MV8 337 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 BPIFA3Q9BQP9 254 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
CLIP1-210ENST00000538120 KLRF2D3W0D1 207 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
CLIP1-210ENST00000538120 MTMR4Q9NYA4 1195 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 BAZ2BQ9UIF8 2168 aaKnown RBP12.23□□□□□ -0.45
CLIP1-210ENST00000538120 GOLGA6L19H0YKK7 550 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 STXBP3O00186 592 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 KIF3CO14782 793 aa12.23□□□□□ -0.45
CLIP1-210ENST00000538120 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms