RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 MTMR4Q9NYA4 1195 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 SLX4Q8IY92 1834 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 PPP1R3GB7ZBB8 358 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 SFPQP23246 707 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 E4F1Q66K89 784 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 CCDC12Q8WUD4 166 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 RRP9O43818 475 aaKnown RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 SERPINC1P01008 464 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 HEATR3Q7Z4Q2 680 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 RASGRP4Q8TDF6 673 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 MRIQ9BWK5 157 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 CCDC194A0A1B0GVG4 234 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
UBE3B-207ENST00000537063 PDHBP11177 359 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 EHD4Q9H223 541 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 PAXBP1Q9Y5B6 917 aa10.57□□□□□ -0.72
UBE3B-207ENST00000537063 A0A1B0GTH6 734 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 GOLGA8HP0CJ92 632 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TNNT1P13805 278 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TPD52L1Q16890 204 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 KRT25Q7Z3Z0 450 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TMEM139Q8IV31 216 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 RRP36Q96EU6 259 aaKnown RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 AFMP43652 599 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 CFAP100Q494V2 611 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 APOBEC3HQ6NTF7 200 aaKnown RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 CCSER1Q9C0I3 900 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TMEM60Q9H2L4 133 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 SHMT1P34896 483 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 NR1I3Q14994 352 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 NAALADL2Q58DX5 795 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 FCHSD1Q86WN1 690 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
UBE3B-207ENST00000537063 TTF2Q9UNY4 1162 aaKnown RBP10.56□□□□□ -0.72
UBE3B-207ENST00000537063 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 MYL1P05976 194 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 MMP10P09238 476 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 AKR1B1P15121 316 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 INF2Q27J81 1249 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 STYK1Q6J9G0 422 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 CDC42EP5Q6NZY7 148 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 KIF2AO00139 706 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-207ENST00000537063 CASP1P29466 404 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 PBX1P40424 430 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 SYCP1Q15431 976 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 ZDHHC15Q96MV8 337 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 C6orf50Q9HD87 102 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 SAMSN1Q9NSI8 373 aaKnown RBP10.55□□□□□ -0.72
UBE3B-207ENST00000537063 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
UBE3B-207ENST00000537063 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-207ENST00000537063 GNA11P29992 359 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 NAPAP54920 295 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 PODNQ7Z5L7 613 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 PPP1R13BQ96KQ4 1090 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 AK8Q96MA6 479 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 NPM3O75607 178 aaKnown RBP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 TXLNAP40222 546 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 TEKT1Q969V4 418 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 PIGSQ96S52 555 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 CPVLQ9H3G5 476 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 MAGEF1Q9HAY2 307 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 TUBB4AP04350 444 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 ZNF658Q5TYW1 1059 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 MXD3Q9BW11 206 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 CUEDC2Q9H467 287 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 USP40Q9NVE5 1235 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 RMND1Q9NWS8 449 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 SEC63Q9UGP8 760 aaKnown RBP10.54□□□□□ -0.72
UBE3B-207ENST00000537063 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
UBE3B-207ENST00000537063 SMCO2A6NFE2 343 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 TTLL1O95922 423 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 APBA3O96018 575 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 KCNB1Q14721 858 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms