RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 SMAD3P84022 425 aaKnown RBP16.38■□□□□ 0.21
COPS7A-206ENST00000537022 KLRC3Q07444 240 aa16.38■□□□□ 0.21
COPS7A-206ENST00000537022 C9orf50Q5SZB4 431 aa16.38■□□□□ 0.21
COPS7A-206ENST00000537022 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
COPS7A-206ENST00000537022 MAMDC4Q6UXC1 1216 aa16.38■□□□□ 0.21
COPS7A-206ENST00000537022 SH3RF1Q7Z6J0 888 aa16.38■□□□□ 0.21
COPS7A-206ENST00000537022 TRIM43Q96BQ3 446 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-206ENST00000537022 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
COPS7A-206ENST00000537022 ZNF287Q9HBT7 754 aa16.38■□□□□ 0.21
COPS7A-206ENST00000537022 DNAJC25-GNG10A0A024R161 153 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 A0A1W2PQ45 241 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-206ENST00000537022 A0A1W2PQY0 241 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
COPS7A-206ENST00000537022 NDUFB10O96000 172 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 PGK1P00558 417 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 ZNF467Q7Z7K2 595 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-206ENST00000537022 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 MKL1Q969V6 931 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-206ENST00000537022 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
COPS7A-206ENST00000537022 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 GPAA1O43292 621 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 TOX2Q96NM4 488 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
COPS7A-206ENST00000537022 FAM184BQ9ULE4 1060 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
COPS7A-206ENST00000537022 MOXD2PA6NHM9 499 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 ZBED4O75132 1171 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-206ENST00000537022 TDO2P48775 406 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 OAZ1P54368 228 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
COPS7A-206ENST00000537022 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
COPS7A-206ENST00000537022 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 KLHDC9Q8NEP7 349 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 FAM161BQ96MY7 647 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
COPS7A-206ENST00000537022 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 TMEM265A0A087WTH1 108 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 DUSP11O75319 330 aaKnown RBP16.34■□□□□ 0.21
COPS7A-206ENST00000537022 RAG1P15918 1043 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 ITGB8P26012 769 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 CST5P28325 142 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-206ENST00000537022 ACLYP53396 1101 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-206ENST00000537022 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 LENG1Q96BZ8 264 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-206ENST00000537022 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 SEMA6BQ9H3T3 888 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 STARD7Q9NQZ5 370 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 MTMR4Q9NYA4 1195 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 CTDP1Q9Y5B0 961 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-206ENST00000537022 CDH23Q9H251 3354 aa16.34■□□□□ 0.21
COPS7A-206ENST00000537022 EYSQ5T1H1 3165 aa16.33■□□□□ 0.21
COPS7A-206ENST00000537022 PATL2C9JE40 543 aaKnown RBP16.33■□□□□ 0.2
COPS7A-206ENST00000537022 PQBP1O60828 265 aaKnown RBP16.33■□□□□ 0.2
COPS7A-206ENST00000537022 TTLL1O95922 423 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 FDX1P10109 184 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
COPS7A-206ENST00000537022 CPXCR1Q8N123 301 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
COPS7A-206ENST00000537022 ABHD16BQ9H3Z7 469 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
COPS7A-206ENST00000537022 DCDC2CA8MYV0 355 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 M0R2C6 588 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 ELP1O95163 1332 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 APPP05067 770 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 FPGSQ05932 587 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 FAAP100Q0VG06 881 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 ACVR2BQ13705 512 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 ANKRD35Q8N283 1001 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 PCSK9Q8NBP7 692 aaKnown RBP16.32■□□□□ 0.2
COPS7A-206ENST00000537022 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 KIFC2Q96AC6 838 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
COPS7A-206ENST00000537022 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
COPS7A-206ENST00000537022 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
COPS7A-206ENST00000537022 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-206ENST00000537022 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-206ENST00000537022 PRDM1O75626 825 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 BMP3P12645 472 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 PDE4BQ07343 736 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 KCNA10Q16322 511 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 FGD4Q96M96 766 aa16.31■□□□□ 0.2
COPS7A-206ENST00000537022 GLT1D1Q96MS3 346 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms