RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
PRKDC-206ENST00000536429 IVNS1ABPQ9Y6Y0 642 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 MYH4Q9Y623 1939 aa15.52■□□□□ 0.07
PRKDC-206ENST00000536429 PARP14Q460N5 1801 aa15.52■□□□□ 0.07
PRKDC-206ENST00000536429 HOXC6P09630 235 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 GJA8P48165 433 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 SNRNP48Q6IEG0 339 aaKnown RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 CPXCR1Q8N123 301 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 U2AF1L4Q8WU68 220 aaKnown RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 DEFB118Q96PH6 123 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 ESYT1Q9BSJ8 1104 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 LSG1Q9H089 658 aaKnown RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 MROH8Q9H579 483 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 PAK6Q9NQU5 681 aaPredicted RBP15.51■□□□□ 0.07
PRKDC-206ENST00000536429 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
PRKDC-206ENST00000536429 FRMPD2Q68DX3 1309 aaPredicted RBP15.5■□□□□ 0.07
PRKDC-206ENST00000536429 ZBED4O75132 1171 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 SLC25A27O95847 323 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 SLC16A2P36021 539 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 STAT2P52630 851 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 CACNB2Q08289 660 aaPredicted RBP15.5■□□□□ 0.07
PRKDC-206ENST00000536429 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
PRKDC-206ENST00000536429 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 STOX1Q6ZVD7 989 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 CYB5R4Q7L1T6 521 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 MAP4K1Q92918 833 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 TEX13BQ9BXU2 312 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
PRKDC-206ENST00000536429 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
PRKDC-206ENST00000536429 LAMA4Q16363 1823 aa15.5■□□□□ 0.07
PRKDC-206ENST00000536429 ZNF536O15090 1300 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 ATP2A1O14983 1001 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 STRNO43815 780 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 IGHA2P01877 340 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 PGK2P07205 417 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 PDHBP11177 359 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 CCND3P30281 292 aaPredicted RBP15.49■□□□□ 0.07
PRKDC-206ENST00000536429 CYP2C19P33261 490 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 DPP9Q86TI2 863 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 FAM160B2Q86V87 743 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 ENAHQ8N8S7 591 aaPredicted RBP15.49■□□□□ 0.07
PRKDC-206ENST00000536429 TTC14Q96N46 770 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 ZSCAN10Q96SZ4 725 aaPredicted RBP15.49■□□□□ 0.07
PRKDC-206ENST00000536429 MMP19Q99542 508 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
PRKDC-206ENST00000536429 RPTORQ8N122 1335 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 PLA2G6O60733 806 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 SGPL1O95470 568 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 SNHG28P0DPA3 235 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 FCER1AP12319 257 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 COL9A3Q14050 684 aaPredicted RBP15.48■□□□□ 0.07
PRKDC-206ENST00000536429 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 DGKHQ86XP1 1220 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
PRKDC-206ENST00000536429 ABRAQ8N0Z2 381 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 TRPV1Q8NER1 839 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 KRT23Q9C075 422 aa15.48■□□□□ 0.07
PRKDC-206ENST00000536429 HMX1Q9NP08 348 aaPredicted RBP15.48■□□□□ 0.07
PRKDC-206ENST00000536429 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
PRKDC-206ENST00000536429 RBBP6Q7Z6E9 1792 aaKnown RBP15.48■□□□□ 0.07
PRKDC-206ENST00000536429 COL11A1P12107 1806 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-206ENST00000536429 TNKSO95271 1327 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 E7EWF7 191 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 GOLGA8HP0CJ92 632 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 ZNF543Q08ER8 600 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 IQCA1Q86XH1 822 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 ANKS1AQ92625 1134 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 CRISPLD2Q9H0B8 497 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 CPVLQ9H3G5 476 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 CNNM2Q9H8M5 875 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 HOMER2Q9NSB8 354 aa15.47■□□□□ 0.07
PRKDC-206ENST00000536429 PDE4DIPQ5VU43 2346 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
PRKDC-206ENST00000536429 OAZ1P54368 228 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 KCTD2Q14681 263 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 SEC23AQ15436 765 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 ZNF792Q3KQV3 632 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 SYDE2Q5VT97 1194 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 MFSD14CQ5VZR4 134 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 OLFML2BQ68BL8 750 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 PNMA1Q8ND90 353 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 MAML3Q96JK9 1138 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 SENP2Q9HC62 589 aa15.46■□□□□ 0.07
PRKDC-206ENST00000536429 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
PRKDC-206ENST00000536429 COPB2P35606 906 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 NT5C2P49902 561 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 ANTXR2P58335 489 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 PRAMEF19Q5SWL8 479 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 381.2 ms