RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 ORC1Q13415 861 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 MMS22LQ6ZRQ5 1243 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 KIAA1958Q8N8K9 716 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 VPS37AQ8NEZ2 397 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 ATXN2LQ8WWM7 1075 aaKnown RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 MFSD3Q96ES6 412 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 TRMT2BQ96GJ1 504 aaKnown RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 SEZ6LQ9BYH1 1024 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 FAM126AQ9BYI3 521 aaPredicted RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 ASPSCR1Q9BZE9 553 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 LACRTQ9GZZ8 138 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 CHMP4BQ9H444 224 aaKnown RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 OSGEPQ9NPF4 335 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 KANSL3Q9P2N6 904 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
GYPA-211ENST00000535709 HDAC9Q9UKV0 1011 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 ODF2LQ9ULJ1 636 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 LEMD3Q9Y2U8 911 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 SLC45A1Q9Y2W3 748 aa5.4□□□□□ -1.54
GYPA-211ENST00000535709 DNMT1P26358 1616 aaKnown RBP5.4□□□□□ -1.55
GYPA-211ENST00000535709 CROCC2H7BZ55 1655 aa5.4□□□□□ -1.55
GYPA-211ENST00000535709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.4□□□□□ -1.55
GYPA-211ENST00000535709 MIA2Q96PC5 1412 aa5.4□□□□□ -1.55
GYPA-211ENST00000535709 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 CCDC85CA6NKD9 419 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 C9IYK1 514 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 GIPC1O14908 333 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 FSCN2O14926 492 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 GSC2O15499 205 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 PDPK1O15530 556 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 FIBPO43427 364 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 DIAPH1O60610 1272 aaKnown RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 VAMP4O75379 141 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 TNFRSF21O75509 655 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 MTA2O94776 668 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 EPHA1P21709 976 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 CLK1P49759 484 aaKnown RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 HNRNPMP52272 730 aaKnown RBP eCLIP5.39□□□□□ -1.55
GYPA-211ENST00000535709 PSMC1P62191 440 aaKnown RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 NFKB2Q00653 900 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 NEXNQ0ZGT2 675 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 PICALMQ13492 652 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 PDE1CQ14123 709 aaPredicted RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 MLC1Q15049 377 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 TAF11Q15544 211 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 SLC4A8Q2Y0W8 1093 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 ZNF354CQ86Y25 554 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 KIAA0825Q8IV33 1275 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 CHCHD4Q8N4Q1 142 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 C1orf127Q8N9H9 656 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 TMEM102Q8N9M5 508 aaPredicted RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 SPON2Q9BUD6 331 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 CHRDQ9H2X0 955 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 SEC31BQ9NQW1 1179 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 DZANK1Q9NVP4 752 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 RNF112Q9ULX5 631 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.39□□□□□ -1.55
GYPA-211ENST00000535709 TRAPPC8Q9Y2L5 1435 aa5.39□□□□□ -1.55
GYPA-211ENST00000535709 RASSF10A6NK89 507 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 NFKBIEO00221 500 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 HMMRO75330 724 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 EDN3P14138 238 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 GLB1P16278 677 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 TYRP1P17643 537 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 TAF1CQ15572 869 aaPredicted RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 NBPF9Q3BBW0 867 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 CT47A1Q5JQC4 288 aaPredicted RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 DACT2Q5SW24 774 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 USPL1Q5W0Q7 1092 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 ACAD11Q709F0 780 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 LMNTD2Q8IXW0 634 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 NDUFAF2Q8N183 169 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 SCLT1Q96NL6 688 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 POP1Q99575 1024 aaKnown RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 RIC8AQ9NPQ8 531 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 ATG3Q9NT62 314 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 CFDP1Q9UEE9 299 aaPredicted RBP5.38□□□□□ -1.55
GYPA-211ENST00000535709 USP25Q9UHP3 1055 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 DAAM1Q9Y4D1 1078 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 MRVI1Q9Y6F6 885 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 SYNRGQ9UMZ2 1314 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 DAPK1P53355 1430 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 ABCC1P33527 1531 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 ARAP3Q8WWN8 1544 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 SYCP2Q9BX26 1530 aa5.38□□□□□ -1.55
GYPA-211ENST00000535709 FAM170AA1A519 330 aa5.37□□□□□ -1.55
GYPA-211ENST00000535709 ANO9A1A5B4 782 aa5.37□□□□□ -1.55
GYPA-211ENST00000535709 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
GYPA-211ENST00000535709 PDE2AO00408 941 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms