RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 VCPKMTQ9H867 229 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 KAT14Q9H8E8 782 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 ELP3Q9H9T3 547 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 CLIP2Q9UDT6 1046 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 LIMD1Q9UGP4 676 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 ABT1Q9ULW3 272 aaKnown RBP10.33□□□□□ -0.76
CD4-204ENST00000535707 FZD1Q9UP38 647 aa10.33□□□□□ -0.76
CD4-204ENST00000535707 A0A1W2PRG0 241 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 MANSC4A6NHS7 340 aaPredicted RBP10.32□□□□□ -0.76
CD4-204ENST00000535707 CCDC69A6NI79 296 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
CD4-204ENST00000535707 WDR46O15213 610 aaKnown RBP10.32□□□□□ -0.76
CD4-204ENST00000535707 NMT2O60551 498 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 CETPP11597 493 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 HSPA6P17066 643 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 FGD1P98174 961 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 TROAPQ12815 778 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 SPP2Q13103 211 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 NOGQ13253 232 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 PABPC4Q13310 644 aaKnown RBP eCLIP10.32□□□□□ -0.76
CD4-204ENST00000535707 DEFB115Q30KQ5 88 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 GPATCH4Q5T3I0 446 aaKnown RBP10.32□□□□□ -0.76
CD4-204ENST00000535707 SYNE3Q6ZMZ3 975 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 Q6ZUG5 572 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 CATIPQ7Z7H3 387 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 SLAIN1Q8ND83 568 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 PNMA1Q8ND90 353 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 FEZ1Q99689 392 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
CD4-204ENST00000535707 TMOD4Q9NZQ9 345 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 SLC12A7Q9Y666 1083 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 MYPNQ86TC9 1320 aa10.32□□□□□ -0.76
CD4-204ENST00000535707 PTPRFP10586 1907 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 CCDC196A0A1B0GTZ2 297 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 POM121CA8CG34 1229 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 F5H6K3 240 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 FDX1P10109 184 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 HOXA7P31268 230 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 KIF5BP33176 963 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 MAP2K2P36507 400 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 GNAQP50148 359 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 KLRC3Q07444 240 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 MTMR2Q13614 643 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 TOB2Q14106 344 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 SHROOM1Q2M3G4 852 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 ASPRV1Q53RT3 343 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 APOA5Q6Q788 366 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ZNF654Q8IZM8 581 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ACER1Q8TDN7 264 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ZSCAN31Q96LW9 406 aaPredicted RBP10.31□□□□□ -0.76
CD4-204ENST00000535707 LZTS2Q9BRK4 669 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 PCDHGA10Q9Y5H3 936 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
CD4-204ENST00000535707 TRIM75PA6NK02 468 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 ZBTB43O43298 467 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 NDUFB10O96000 172 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 PDHBP11177 359 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 GJA5P36382 358 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 TM4SF4P48230 202 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 IER5LQ5T953 404 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 SLFN13Q68D06 897 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 NFXL1Q6ZNB6 911 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 CHST3Q7LGC8 479 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 ANKRD23Q86SG2 305 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
CD4-204ENST00000535707 BRF1Q92994 677 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 SNX21Q969T3 373 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
CD4-204ENST00000535707 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
CD4-204ENST00000535707 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 AGTPBP1Q9UPW5 1226 aa10.3□□□□□ -0.76
CD4-204ENST00000535707 KLF18A0A0U1RQI7 1052 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 PALM3A6NDB9 673 aaPredicted RBP10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 DHX16O60231 1041 aaKnown RBP10.29□□□□□ -0.76
CD4-204ENST00000535707 ALDH1A1P00352 501 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 BMP3P12645 472 aa10.29□□□□□ -0.76
CD4-204ENST00000535707 CPA1P15085 419 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms