RNA–Protein interactions for RNA: ENST00000535645.1

C2CD3-208, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-208ENST00000535645 STAG2Q8N3U4 1231 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 PRPF38AQ8NAV1 312 aaKnown RBP8.43□□□□□ -1.06
C2CD3-208ENST00000535645 PIBF1Q8WXW3 757 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 BRI3BPQ8WY22 251 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 RRP36Q96EU6 259 aaKnown RBP8.43□□□□□ -1.06
C2CD3-208ENST00000535645 MS4A4AQ96JQ5 239 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 SLF1Q9BQI6 1058 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 SEC63Q9UGP8 760 aaKnown RBP8.43□□□□□ -1.06
C2CD3-208ENST00000535645 MAD2L2Q9UI95 211 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
C2CD3-208ENST00000535645 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 PDHXO00330 501 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 PLA2G6O60733 806 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 PLEKHA8P1O95397 391 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SMARCA1P28370 1054 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 CDC27P30260 824 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 DSG3P32926 999 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 MAP2K2P36507 400 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 TRAF1Q13077 416 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 TREML2Q5T2D2 321 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 ADGRF4Q8IZF3 695 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SRBD1Q8N5C6 995 aaKnown RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SMCR8Q8TEV9 937 aaPredicted RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 WASF1Q92558 559 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 GTF3C6Q969F1 213 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SLC26A6Q9BXS9 759 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 FBXO28Q9NVF7 368 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 HPS5Q9UPZ3 1129 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SMC3Q9UQE7 1217 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 SLC45A1Q9Y2W3 748 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
C2CD3-208ENST00000535645 PHIPQ8WWQ0 1821 aa8.42□□□□□ -1.06
C2CD3-208ENST00000535645 TESPA1A2RU30 521 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 AOC2O75106 756 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 LARGE1O95461 756 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 IFNAR1P17181 557 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 XBP1P17861 261 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 TM4SF4P48230 202 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 VEGFBP49765 207 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PLS1Q14651 629 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 BTNL9Q6UXG8 535 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 RASGRP2Q7LDG7 609 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 HOMER1Q86YM7 354 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 CPXCR1Q8N123 301 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 MB21D1Q8N884 522 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 GTF3C2Q8WUA4 911 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PHKBQ93100 1093 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PARK7Q99497 189 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 P2RX7Q99572 595 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 LLPHQ9BRT6 129 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PAGR1Q9BTK6 254 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 BEGAINQ9BUH8 593 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 SPZ1Q9BXG8 430 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 CWC22Q9HCG8 908 aaKnown RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 ORC3Q9UBD5 711 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PNMA2Q9UL42 364 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PPP1R9AQ9ULJ8 1098 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-208ENST00000535645 PTPRFP10586 1907 aa8.41□□□□□ -1.06
C2CD3-208ENST00000535645 MYPNQ86TC9 1320 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PTPDC1A2A3K4 754 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PRPF3O43395 683 aaKnown RBP8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PPFIA3O75145 1194 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 DEXIO95424 95 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 GCLCP48506 637 aaPredicted RBP8.4□□□□□ -1.06
C2CD3-208ENST00000535645 HERVK_113P62684 666 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 MOGSQ13724 837 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 TRIM29Q14134 588 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 CDC37Q16543 378 aaPredicted RBP8.4□□□□□ -1.06
C2CD3-208ENST00000535645 CCDC174Q6PII3 467 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 FBXO11Q86XK2 927 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 IFNL1Q8IU54 200 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 FAM43AQ8N2R8 423 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 ATG4CQ96DT6 458 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 DDX11Q96FC9 970 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PIGSQ96S52 555 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 PTPN18Q99952 460 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 RNF26Q9BY78 433 aaPredicted RBP8.4□□□□□ -1.06
C2CD3-208ENST00000535645 CPVLQ9H3G5 476 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.06
C2CD3-208ENST00000535645 ZCCHC17Q9NP64 241 aaKnown RBP8.4□□□□□ -1.06
C2CD3-208ENST00000535645 FOXD4L1Q9NU39 408 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms