RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 ZNF654Q8IZM8 581 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 TM6SF1Q9BZW5 370 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 SPATC1LQ9H0A9 340 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 CTDP1Q9Y5B0 961 aaPredicted RBP28.26■■■□□ 2.11
SIPA1-210ENST00000534406 ZBED4O75132 1171 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 DDAH1O94760 285 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 ECM2O94769 699 aaPredicted RBP28.25■■■□□ 2.11
SIPA1-210ENST00000534406 FDX1P10109 184 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 FGD1P98174 961 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 CAP1Q01518 475 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 SYDE2Q5VT97 1194 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 TTBK2Q6IQ55 1244 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 REPS2Q8NFH8 660 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 TRIM47Q96LD4 638 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 EFCC1Q9HA90 598 aa28.25■■■□□ 2.11
SIPA1-210ENST00000534406 FMNL1O95466 1100 aaPredicted RBP28.24■■■□□ 2.11
SIPA1-210ENST00000534406 GOLGA8HP0CJ92 632 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 CTGFP29279 349 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 SLC16A2P36021 539 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 PLS1Q14651 629 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 TMEM132BQ14DG7 1078 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 Q3C1V9 767 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 SGMS1Q86VZ5 419 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 CCAR1Q8IX12 1150 aaKnown RBP28.24■■■□□ 2.11
SIPA1-210ENST00000534406 SLC38A10Q9HBR0 1119 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 ZSWIM6Q9HCJ5 1215 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 PRR12Q9ULL5 1215 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 TRIM17Q9Y577 477 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 CYP46A1Q9Y6A2 500 aa28.24■■■□□ 2.11
SIPA1-210ENST00000534406 TNPO2O14787 897 aaKnown RBP28.23■■■□□ 2.11
SIPA1-210ENST00000534406 GNRH1P01148 92 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 MAPK4P31152 587 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 TROAPQ12815 778 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 GRM4Q14833 912 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 RUFY3Q7L099 469 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 OTOP1Q7RTM1 612 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 PORCNQ9H237 461 aa28.23■■■□□ 2.11
SIPA1-210ENST00000534406 ZNF214Q9UL59 606 aaPredicted RBP28.23■■■□□ 2.11
SIPA1-210ENST00000534406 NUP133Q8WUM0 1156 aa28.22■■■□□ 2.11
SIPA1-210ENST00000534406 MOV10L1Q9BXT6 1211 aaKnown RBP28.22■■■□□ 2.11
SIPA1-210ENST00000534406 CWC22Q9HCG8 908 aaKnown RBP28.22■■■□□ 2.11
SIPA1-210ENST00000534406 SLC12A7Q9Y666 1083 aa28.22■■■□□ 2.11
SIPA1-210ENST00000534406 Q6ZUG5 572 aa28.21■■■□□ 2.11
SIPA1-210ENST00000534406 SHCBP1Q8NEM2 672 aa28.21■■■□□ 2.11
SIPA1-210ENST00000534406 MYL10Q9BUA6 226 aa28.21■■■□□ 2.11
SIPA1-210ENST00000534406 TEX13BQ9BXU2 312 aa28.21■■■□□ 2.11
SIPA1-210ENST00000534406 UPF3BQ9BZI7 483 aaKnown RBP28.21■■■□□ 2.11
SIPA1-210ENST00000534406 DOCK3Q8IZD9 2030 aa28.21■■■□□ 2.11
SIPA1-210ENST00000534406 ATP2A1O14983 1001 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 CALM1P0DP23 149 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 CALM2P0DP24 149 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 CALM3P0DP25 149 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 OAZ1P54368 228 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 WDR78Q5VTH9 848 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 SYNE3Q6ZMZ3 975 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 CTCFLQ8NI51 663 aaPredicted RBP28.2■■■□□ 2.1
SIPA1-210ENST00000534406 COA7Q96BR5 231 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 IL17RAQ96F46 866 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 MAP3K14Q99558 947 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 UPF2Q9HAU5 1272 aaKnown RBP28.2■■■□□ 2.1
SIPA1-210ENST00000534406 MAD2L2Q9UI95 211 aa28.2■■■□□ 2.1
SIPA1-210ENST00000534406 PALM3A6NDB9 673 aaPredicted RBP28.19■■■□□ 2.1
SIPA1-210ENST00000534406 SLC25A27O95847 323 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 HOXD10P28358 340 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 COPB2P35606 906 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 STAT3P40763 770 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 SNRNP48Q6IEG0 339 aaKnown RBP28.19■■■□□ 2.1
SIPA1-210ENST00000534406 APOA5Q6Q788 366 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 RIOX2Q8IUF8 465 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 CPXCR1Q8N123 301 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 STAG2Q8N3U4 1231 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 RANBP17Q9H2T7 1088 aaKnown RBP28.19■■■□□ 2.1
SIPA1-210ENST00000534406 RAVER2Q9HCJ3 691 aaKnown RBP28.19■■■□□ 2.1
SIPA1-210ENST00000534406 PLXNB2O15031 1838 aa28.19■■■□□ 2.1
SIPA1-210ENST00000534406 KLRF2D3W0D1 207 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 KIF5BP33176 963 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 MICU3Q86XE3 530 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 NCAPG2Q86XI2 1143 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 FBXL16Q8N461 479 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 BRF1Q92994 677 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 UBA5Q9GZZ9 404 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 CPVLQ9H3G5 476 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 SRRDQ9UH36 339 aa28.18■■■□□ 2.1
SIPA1-210ENST00000534406 HTTP42858 3142 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 KLF18A0A0U1RQI7 1052 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 DHX16O60231 1041 aaKnown RBP28.17■■■□□ 2.1
SIPA1-210ENST00000534406 ERCC3P19447 782 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 PRMT2P55345 433 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 SNAP25P60880 206 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 COL13A1Q5TAT6 717 aaPredicted RBP28.17■■■□□ 2.1
SIPA1-210ENST00000534406 CCDC174Q6PII3 467 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 GPR142Q7Z601 462 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 PLEKHH3Q7Z736 793 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 MROH8Q9H579 483 aa28.17■■■□□ 2.1
SIPA1-210ENST00000534406 ZNF236Q9UL36 1845 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 PKN2Q16513 984 aaKnown RBP28.16■■■□□ 2.1
SIPA1-210ENST00000534406 RAB11FIP4Q86YS3 637 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 SOCS4Q8WXH5 440 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 C22orf23Q9BZE7 217 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms