RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 ALX1Q15699 326 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 ANO1Q5XXA6 986 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 LHX8Q68G74 356 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 C7orf61Q8IZ16 206 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 ABRAQ8N0Z2 381 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 PRPF38AQ8NAV1 312 aaKnown RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 TRPV1Q8NER1 839 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 MKL1Q969V6 931 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 DDX20Q9UHI6 824 aaKnown RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 FEM1BQ9UK73 627 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 COLQQ9Y215 455 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-225ENST00000533704 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
CAPN1-225ENST00000533704 TMEM232C9JQI7 657 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 ORC4O43929 436 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 MCCP23508 829 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 COPB2P35606 906 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-225ENST00000533704 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 PRAMEF19Q5SWL8 479 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 MAML3Q96JK9 1138 aa12.35□□□□□ -0.43
CAPN1-225ENST00000533704 SLC34A2O95436 690 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 CYBAP13498 195 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 SLC1A4P43007 532 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 IL17RBQ9NRM6 502 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-225ENST00000533704 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
CAPN1-225ENST00000533704 MYH6P13533 1939 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 HIP1O00291 1037 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 MSCO60682 206 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 PDE4AP27815 886 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 STAT2P52630 851 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 SNAP25P60880 206 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 SLC38A10Q9HBR0 1119 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 PFASO15067 1338 aa12.33□□□□□ -0.44
CAPN1-225ENST00000533704 SYN1P17600 705 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 AKNAD1Q5T1N1 836 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 GJC2Q5T442 439 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-225ENST00000533704 TBC1D10CQ8IV04 446 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 TINF2Q9BSI4 451 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-225ENST00000533704 ZMYM6O95789 1325 aa12.32□□□□□ -0.44
CAPN1-225ENST00000533704 ZNF213O14771 459 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 SEPT4O43236 478 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 IGHA2P01877 340 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 FGRP09769 529 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 ALAS1P13196 640 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 AGBL1Q96MI9 1066 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 NEDD4P46934 1319 aa12.31□□□□□ -0.44
CAPN1-225ENST00000533704 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-225ENST00000533704 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 FDX1P10109 184 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 COL6A1P12109 1028 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 SLC16A2P36021 539 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 OAZ1P54368 228 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 LRRC26Q2I0M4 334 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 ARRDC4Q8NCT1 418 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 DCAF4Q8WV16 495 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 FBXO40Q9UH90 709 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms