RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CTNNA1P35221 906 aaKnown RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ADKP55263 362 aaKnown RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 RASA3Q14644 834 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ZSCAN26Q16670 478 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ICE2Q659A1 982 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 NELFCDQ8IXH7 590 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC89Q8N998 374 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 TSC1Q92574 1164 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 EAF2Q96CJ1 260 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 PCDHA7Q9UN72 937 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 SYNMO15061 1565 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 TAF5LO75529 589 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ZWINTO95229 277 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 MYL1P05976 194 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 PDE6AP16499 860 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 PTH1RQ03431 593 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 GEN1Q17RS7 908 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 SPATA31E1Q6ZUB1 1445 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ZBTB38Q8NAP3 1195 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 SLC17A8Q8NDX2 589 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 FBXO18Q8NFZ0 1043 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 ARHGEF2Q92974 986 aaKnown RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 RIC8AQ9NPQ8 531 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 TRPC6Q9Y210 931 aa7.71□□□□□ -1.17
CTNND1-236ENST00000533667 SEMA3EO15041 775 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 STX2P32856 288 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 RPS8P62241 208 aaKnown RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 BIRC2Q13490 618 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 RNF34Q969K3 372 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 TACO1Q9BSH4 297 aaKnown RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 FOXP1Q9H334 677 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 POLR3EQ9NVU0 708 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.71□□□□□ -1.189e-8■□□□□ 10.6
CTNND1-236ENST00000533667 SOS2Q07890 1332 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 GAS7O60861 476 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 ALDH1B1P30837 517 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 EIF6P56537 245 aaKnown RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 CCDC92Q53HC0 331 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 GPBP1Q86WP2 473 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 RNF10Q8N5U6 811 aaKnown RBP7.71□□□□□ -1.18
CTNND1-236ENST00000533667 NSMCE1Q8WV22 266 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 PIK3R5Q8WYR1 880 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 KLHL14Q9P2G3 628 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 COL4A3BPQ9Y5P4 624 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 DISP1Q96F81 1524 aa7.71□□□□□ -1.18
CTNND1-236ENST00000533667 TNKSO95271 1327 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 KRIT1O00522 736 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 RPN1P04843 607 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 EEF1GP26641 437 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 MAN1A1P33908 653 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 SLC39A14Q15043 492 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PNMA8AQ86V59 439 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 MAPKAPK5Q8IW41 473 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 U2AF1L4Q8WU68 220 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 TGFBRAP1Q8WUH2 860 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 HAUS1Q96CS2 278 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 AK8Q96MA6 479 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 NCAPGQ9BPX3 1015 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 NUF2Q9BZD4 464 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 NLRC4Q9NPP4 1024 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 FOSP01100 380 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 H2AFZP0C0S5 128 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 MYCLP12524 364 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 HADHQ16836 314 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 AOC3Q16853 763 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 GNPTABQ3T906 1256 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 H2AFVQ71UI9 128 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 KRT26Q7Z3Y9 468 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 GPT2Q8TD30 523 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 RMDN2Q96LZ7 410 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 USP17L21D6R901 530 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 hCG_1984214I3L0E3 225 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 LONRF3Q496Y0 759 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PPP1R2P3Q6NXS1 205 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 ARMCX6Q7L4S7 300 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 MIER3Q7Z3K6 550 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 ZNF713Q8N859 430 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 UIMC1Q96RL1 719 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 RNF26Q9BY78 433 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 RNF14Q9UBS8 474 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 CDC23Q9UJX2 597 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PCDHA12Q9UN75 941 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 MRPL11Q9Y3B7 192 aaKnown RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 EPN1Q9Y6I3 576 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-236ENST00000533667 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 CFBP00751 764 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 CD19P15391 556 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 KIF11P52732 1056 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 GNGT1P63211 74 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 CUL4AQ13619 759 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 HACE1Q8IYU2 909 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 DHTKD1Q96HY7 919 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms